RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 SLC25A11Q02978 314 aaKnown RBP16.96■□□□□ 0.3
TMEM220-202ENST00000455996 ZNF211Q13398 564 aaPredicted RBP16.96■□□□□ 0.3
TMEM220-202ENST00000455996 EFHC1Q5JVL4 640 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 SEL1L2Q5TEA6 688 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 FAM171A1Q5VUB5 890 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 C4orf50Q6ZRC1 276 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 DCP1BQ8IZD4 617 aaKnown RBP16.96■□□□□ 0.3
TMEM220-202ENST00000455996 NCAPGQ9BPX3 1015 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 C11orf84Q9BUA3 381 aaPredicted RBP16.96■□□□□ 0.3
TMEM220-202ENST00000455996 USTQ9Y2C2 406 aa16.96■□□□□ 0.3
TMEM220-202ENST00000455996 TARSL2A2RTX5 802 aaKnown RBP16.95■□□□□ 0.3
TMEM220-202ENST00000455996 CARNS1A5YM72 827 aa16.95■□□□□ 0.3
TMEM220-202ENST00000455996 FSCN2O14926 492 aa16.95■□□□□ 0.3
TMEM220-202ENST00000455996 UPP2O95045 317 aa16.95■□□□□ 0.3
TMEM220-202ENST00000455996 LCP1P13796 627 aa16.95■□□□□ 0.3
TMEM220-202ENST00000455996 TCF4P15884 667 aa16.95■□□□□ 0.3
TMEM220-202ENST00000455996 DEFB103AP81534 67 aa16.95■□□□□ 0.3
TMEM220-202ENST00000455996 MRPS5P82675 430 aaKnown RBP16.95■□□□□ 0.3
TMEM220-202ENST00000455996 ADIGQ0VDE8 80 aa16.95■□□□□ 0.3
TMEM220-202ENST00000455996 TAF5Q15542 800 aa16.95■□□□□ 0.3
TMEM220-202ENST00000455996 CCDC14Q49A88 953 aa16.95■□□□□ 0.3
TMEM220-202ENST00000455996 GLE1Q53GS7 698 aaKnown RBP16.95■□□□□ 0.3
TMEM220-202ENST00000455996 DAB2IPQ5VWQ8 1189 aa16.95■□□□□ 0.3
TMEM220-202ENST00000455996 SLC13A5Q86YT5 568 aaPredicted RBP16.95■□□□□ 0.3
TMEM220-202ENST00000455996 CMTR2Q8IYT2 770 aaKnown RBP16.95■□□□□ 0.3
TMEM220-202ENST00000455996 RNF168Q8IYW5 571 aaPredicted RBP16.95■□□□□ 0.3
TMEM220-202ENST00000455996 BCL7CQ8WUZ0 217 aaPredicted RBP16.95■□□□□ 0.3
TMEM220-202ENST00000455996 CENPIQ92674 756 aaPredicted RBP16.95■□□□□ 0.3
TMEM220-202ENST00000455996 FUBP3Q96I24 572 aaKnown RBP eCLIP16.95■□□□□ 0.3
TMEM220-202ENST00000455996 ANKZF1Q9H8Y5 726 aa16.95■□□□□ 0.3
TMEM220-202ENST00000455996 LRRC4Q9HBW1 653 aa16.95■□□□□ 0.3
TMEM220-202ENST00000455996 DMAP1Q9NPF5 467 aaPredicted RBP16.95■□□□□ 0.3
TMEM220-202ENST00000455996 CNGB3Q9NQW8 809 aa16.95■□□□□ 0.3
TMEM220-202ENST00000455996 DDX56Q9NY93 547 aaKnown RBP16.95■□□□□ 0.3
TMEM220-202ENST00000455996 SART1O43290 800 aaKnown RBP16.94■□□□□ 0.3
TMEM220-202ENST00000455996 TUBBP07437 444 aa16.94■□□□□ 0.3
TMEM220-202ENST00000455996 PTPN7P35236 360 aa16.94■□□□□ 0.3
TMEM220-202ENST00000455996 RNASE9P60153 205 aaKnown RBP16.94■□□□□ 0.3
TMEM220-202ENST00000455996 PPIGQ13427 754 aaKnown RBP eCLIP16.94■□□□□ 0.3
TMEM220-202ENST00000455996 NFE2Q16621 373 aaPredicted RBP16.94■□□□□ 0.3
TMEM220-202ENST00000455996 LONRF2Q1L5Z9 754 aa16.94■□□□□ 0.3
TMEM220-202ENST00000455996 ZNF280DQ6N043 979 aa16.94■□□□□ 0.3
TMEM220-202ENST00000455996 AADACL2Q6P093 401 aa16.94■□□□□ 0.3
TMEM220-202ENST00000455996 C16orf59Q7L2K0 433 aa16.94■□□□□ 0.3
TMEM220-202ENST00000455996 TMEM173Q86WV6 379 aaPredicted RBP16.94■□□□□ 0.3
TMEM220-202ENST00000455996 RCOR2Q8IZ40 523 aa16.94■□□□□ 0.3
TMEM220-202ENST00000455996 CLEC4CQ8WTT0 213 aa16.94■□□□□ 0.3
TMEM220-202ENST00000455996 KCNK16Q96T55 309 aa16.94■□□□□ 0.3
TMEM220-202ENST00000455996 DDX23Q9BUQ8 820 aaKnown RBP16.94■□□□□ 0.3
TMEM220-202ENST00000455996 H7C4K7 107 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 KRIT1O00522 736 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 HSF2BPO75031 334 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 DAB1O75553 588 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 RNF8O76064 485 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 ZRANB2O95218 330 aaKnown RBP eCLIP16.93■□□□□ 0.3
TMEM220-202ENST00000455996 KRT7P08729 469 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 BDNFP23560 247 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 HOXD11P31277 338 aaPredicted RBP16.93■□□□□ 0.3
TMEM220-202ENST00000455996 MAGEA11P43364 429 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 ALDH7A1P49419 539 aaKnown RBP16.93■□□□□ 0.3
TMEM220-202ENST00000455996 TKTL1P51854 596 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 COPS2P61201 443 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 SMARCB1Q12824 385 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 PPP2R5EQ16537 467 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 HADHQ16836 314 aaKnown RBP16.93■□□□□ 0.3
TMEM220-202ENST00000455996 SPATA2LQ8IUW3 424 aaPredicted RBP16.93■□□□□ 0.3
TMEM220-202ENST00000455996 SIX6OS1Q8N1H7 587 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 IRGQQ8WZA9 623 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 RUBCNQ92622 972 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 IGSF21Q96ID5 467 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 RBM41Q96IZ5 413 aaKnown RBP16.93■□□□□ 0.3
TMEM220-202ENST00000455996 SLC2A13Q96QE2 648 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 TTPALQ9BTX7 342 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 RAB21Q9UL25 225 aa16.93■□□□□ 0.3
TMEM220-202ENST00000455996 NT5C1B-RDH14C9J2C7 533 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 GRAP2O75791 330 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 TRUB2O95900 331 aaKnown RBP16.92■□□□□ 0.3
TMEM220-202ENST00000455996 ACRP10323 421 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 IL1R2P27930 398 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 MIPP30301 263 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 SDC4P31431 198 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 DAOAP59103 153 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 SIX1Q15475 284 aaPredicted RBP16.92■□□□□ 0.3
TMEM220-202ENST00000455996 TAZQ16635 292 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 CTXN3Q4LDR2 81 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 PM20D1Q6GTS8 502 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 VSTM1Q6UX27 236 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 ANKS3Q6ZW76 656 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 GPRIN1Q7Z2K8 1008 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 BNIPLQ7Z465 357 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 ZDHHC14Q8IZN3 488 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 MAIP1Q8WWC4 291 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 NT5C3BQ969T7 300 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 RHOBTB2Q9BYZ6 727 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 ULBP1Q9BZM6 244 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 USP3Q9Y6I4 520 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 VWA8A3KMH1 1905 aa16.92■□□□□ 0.3
TMEM220-202ENST00000455996 COL4A4P53420 1690 aaPredicted RBP16.92■□□□□ 0.3
TMEM220-202ENST00000455996 NLRC5Q86WI3 1866 aa16.91■□□□□ 0.3
TMEM220-202ENST00000455996 H2AFXP16104 143 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms