RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 MRNIPQ6NTE8 343 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 C16orf62Q7Z3J2 963 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 ZNF589Q86UQ0 364 aaPredicted RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 B4GALNT2Q8NHY0 566 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 RP9Q8TA86 221 aaKnown RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 CDCA5Q96FF9 252 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 APOL2Q9BQE5 337 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 UNC45AQ9H3U1 944 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 SERHL2Q9H4I8 314 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 SERHLQ9NQF3 203 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 VPS54Q9P1Q0 977 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 TAGLN3Q9UI15 199 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 KPNA5O15131 536 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 FASP25445 335 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 CERKLQ49MI3 558 aaPredicted RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 SCARA3Q6AZY7 606 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 UNC45BQ8IWX7 931 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 FAM162AQ96A26 154 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 EMILIN2Q9BXX0 1053 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 MRPL4Q9BYD3 311 aaKnown RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 EPB41L4BQ9H329 900 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 DPP7Q9UHL4 492 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 ARFGEF3Q5TH69 2177 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 FAM220BPB1ANY3 271 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 CLDN3O15551 220 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 AKAP8O43823 692 aaKnown RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 PGM3O95394 542 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 PDHA1P08559 390 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 PRKCQQ04759 706 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 ABCB5Q2M3G0 1257 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 SH3BP5LQ7L8J4 393 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 NET1Q7Z628 596 aaPredicted RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 GJA10Q969M2 543 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 MMS19Q96T76 1030 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 LMTK3Q96Q04 1460 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 SPATA31D1Q6ZQQ2 1576 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 QSOX1O00391 747 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 DLATP10515 647 aaKnown RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 SLC34A1Q06495 639 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 FAM47AQ5JRC9 791 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 SLC30A8Q8IWU4 369 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 DPF3Q92784 378 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 TMCO6Q96DC7 493 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 PTCD3Q96EY7 689 aaKnown RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 TRPM5Q9NZQ8 1165 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 EIF3LQ9Y262 564 aaKnown RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 BBIP1A8MTZ0 92 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 BTNL10A8MVZ5 291 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 GNPATO15228 680 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 CHP2O43745 196 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 NCAM1P13591 858 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 TCF4P15884 667 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 CES1P23141 567 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 SCTRP47872 440 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 NCALDP61601 193 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 PRKG1Q13976 671 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 PTGISQ16647 500 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 PDZK1Q5T2W1 519 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 BSPRYQ5W0U4 402 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 MAPKAPK5Q8IW41 473 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 AP1M1Q9BXS5 423 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 ZCCHC2Q9C0B9 1178 aaKnown RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 STOX2Q9P2F5 926 aaPredicted RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 ADAMTS1Q9UHI8 967 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 TUBE1Q9UJT0 475 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 TYSND1Q2T9J0 566 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 FMR1NBQ8N0W7 255 aaPredicted RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 FAM133AQ8N9E0 248 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 QRFPRQ96P65 431 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 PLGRKTQ9HBL7 147 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 PLK2Q9NYY3 685 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 SPDYE16A6NNV3 312 aaPredicted RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 PECAM1P16284 738 aaPredicted RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 ADD1P35611 737 aaKnown RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 FXR1P51114 621 aaKnown RBP eCLIP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 EPHB1P54762 984 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 TRIM25Q14258 630 aaKnown RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 NR1I3Q14994 352 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 SPDYE2Q495Y8 402 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 LHFPL3Q86UP9 236 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 SNX32Q86XE0 403 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 GDAP1Q8TB36 358 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 FAM212AQ96EL1 285 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 MED10Q9BTT4 135 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 MYL10Q9BUA6 226 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 MLXIPQ9HAP2 919 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 CNOT8Q9UFF9 292 aaKnown RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 SPDYE2BA6NHP3 402 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 S100A6P06703 90 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 SPDYE6P0CI01 402 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 SLC26A2P50443 739 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 TRAP1Q12931 704 aaKnown RBP5.39□□□□□ -1.55
CSMD3-204ENST00000455883 MPP3Q13368 585 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 IL18R1Q13478 541 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 KRT28Q7Z3Y7 464 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 STX12Q86Y82 276 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 SFRP1Q8N474 314 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 DPH5Q9H2P9 285 aa5.39□□□□□ -1.55
CSMD3-204ENST00000455883 NOL11Q9H8H0 719 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms