RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 KIF9Q9HAQ2 790 aa18.38■□□□□ 0.53
USP39-208ENST00000455732 FAM49BQ9NUQ9 324 aa18.38■□□□□ 0.53
USP39-208ENST00000455732 COMMD8Q9NX08 183 aa18.38■□□□□ 0.53
USP39-208ENST00000455732 IL37Q9NZH6 218 aa18.38■□□□□ 0.53
USP39-208ENST00000455732 ZFHX2Q9C0A1 2572 aaPredicted RBP18.38■□□□□ 0.53
USP39-208ENST00000455732 DMDP11532 3685 aa18.38■□□□□ 0.53
USP39-208ENST00000455732 FAM170BA6NMN3 283 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 TNFRSF10BO14763 440 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 RTN3O95197 1032 aaPredicted RBP18.37■□□□□ 0.53
USP39-208ENST00000455732 FAM200BP0CF97 657 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 TARSP26639 723 aaKnown RBP18.37■□□□□ 0.53
USP39-208ENST00000455732 AVPR1AP37288 418 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 FZD5Q13467 585 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 UBXN2BQ14CS0 331 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 ANGPT1Q15389 498 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 TXNDC8Q6A555 127 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 ZNF852Q6ZMS4 543 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 NUP93Q8N1F7 819 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 ZNF687Q8N1G0 1237 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 SLC4A11Q8NBS3 891 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 ZMIZ2Q8NF64 920 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 OVCA2Q8WZ82 227 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 CYFIP2Q96F07 1278 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 NT5C1BQ96P26 610 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 KCNK16Q96T55 309 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 NELL2Q99435 816 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 SMOQ99835 787 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 SMG9Q9H0W8 520 aaKnown RBP18.37■□□□□ 0.53
USP39-208ENST00000455732 PNPLA8Q9NP80 782 aa18.37■□□□□ 0.53
USP39-208ENST00000455732 FAM92AA1XBS5 289 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 DPYSL4O14531 572 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 PDE6CP51160 858 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 SLC5A3P53794 718 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 RAD23BP54727 409 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 MLLT6P55198 1093 aaPredicted RBP18.36■□□□□ 0.53
USP39-208ENST00000455732 ARHGAP29Q52LW3 1261 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 YAF2Q8IY57 180 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 CELF5Q8N6W0 485 aaKnown RBP18.36■□□□□ 0.53
USP39-208ENST00000455732 PDZD8Q8NEN9 1154 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 BPIFB1Q8TDL5 484 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 USP13Q92995 863 aaPredicted RBP18.36■□□□□ 0.53
USP39-208ENST00000455732 CLDN23Q96B33 292 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 TMEM176AQ96HP8 235 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 SLITRK1Q96PX8 696 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 TRPM5Q9NZQ8 1165 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 GCNT4Q9P109 453 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 CCL26Q9Y258 94 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 PIAS3Q9Y6X2 628 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 WDR87Q6ZQQ6 2873 aa18.36■□□□□ 0.53
USP39-208ENST00000455732 RIF1Q5UIP0 2472 aaKnown RBP18.35■□□□□ 0.53
USP39-208ENST00000455732 TRAV19A0A0A6YYK7 116 aa18.35■□□□□ 0.53
USP39-208ENST00000455732 ZNF840PA6NDX5 716 aa18.35■□□□□ 0.53
USP39-208ENST00000455732 MAN2B1O00754 1011 aa18.35■□□□□ 0.53
USP39-208ENST00000455732 BEST1O76090 585 aa18.35■□□□□ 0.53
USP39-208ENST00000455732 YWHAQP27348 245 aa18.35■□□□□ 0.53
USP39-208ENST00000455732 ADORA2BP29275 332 aa18.35■□□□□ 0.53
USP39-208ENST00000455732 NBL1P41271 181 aa18.35■□□□□ 0.53
USP39-208ENST00000455732 GCNT1Q02742 428 aa18.35■□□□□ 0.53
USP39-208ENST00000455732 ZNF394Q53GI3 561 aa18.35■□□□□ 0.53
USP39-208ENST00000455732 ARHGAP17Q68EM7 881 aa18.35■□□□□ 0.53
USP39-208ENST00000455732 CLEC20AQ6ZU45 233 aa18.35■□□□□ 0.53
USP39-208ENST00000455732 FAM114A1Q8IWE2 563 aa18.35■□□□□ 0.53
USP39-208ENST00000455732 EHBP1Q8NDI1 1231 aa18.35■□□□□ 0.53
USP39-208ENST00000455732 ZFYVE19Q96K21 471 aa18.35■□□□□ 0.53
USP39-208ENST00000455732 TDP1Q9NUW8 608 aa18.35■□□□□ 0.53
USP39-208ENST00000455732 MRPS17Q9Y2R5 130 aaKnown RBP18.35■□□□□ 0.53
USP39-208ENST00000455732 C2orf78A6NCI8 922 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 PROB1E7EW31 1015 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 OLFM2O95897 454 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 TCF3P15923 654 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 MAP3K7CLP57077 242 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 PLCB2Q00722 1185 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 LRMPQ12912 555 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 TAF10Q12962 218 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 TPD52L1Q16890 204 aaPredicted RBP18.34■□□□□ 0.53
USP39-208ENST00000455732 CCDC183Q5T5S1 534 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 PPP1R26Q5T8A7 1209 aaPredicted RBP18.34■□□□□ 0.53
USP39-208ENST00000455732 SNX30Q5VWJ9 437 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 C1orf210Q8IVY1 113 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 PPM1KQ8N3J5 372 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 RIN3Q8TB24 985 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 HEXIM2Q96MH2 286 aaKnown RBP18.34■□□□□ 0.53
USP39-208ENST00000455732 SLC22A12Q96S37 553 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 DUSP16Q9BY84 665 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 INTS2Q9H0H0 1204 aaKnown RBP18.34■□□□□ 0.53
USP39-208ENST00000455732 TRPC7Q9HCX4 862 aa18.34■□□□□ 0.53
USP39-208ENST00000455732 GTPBP10A4D1E9 387 aaKnown RBP18.33■□□□□ 0.52
USP39-208ENST00000455732 HHLA1C9JL84 531 aa18.33■□□□□ 0.52
USP39-208ENST00000455732 CKMP06732 381 aa18.33■□□□□ 0.52
USP39-208ENST00000455732 USP17L7P0C7H9 530 aa18.33■□□□□ 0.52
USP39-208ENST00000455732 ZDHHC11BP0C7U3 371 aa18.33■□□□□ 0.52
USP39-208ENST00000455732 ACO1P21399 889 aaKnown RBP18.33■□□□□ 0.52
USP39-208ENST00000455732 MAGEA9P43362 315 aa18.33■□□□□ 0.52
USP39-208ENST00000455732 RPS9P46781 194 aaKnown RBP18.33■□□□□ 0.52
USP39-208ENST00000455732 SCAMP5Q8TAC9 235 aa18.33■□□□□ 0.52
USP39-208ENST00000455732 CSGALNACT1Q8TDX6 532 aa18.33■□□□□ 0.52
USP39-208ENST00000455732 FAM3CQ92520 227 aa18.33■□□□□ 0.52
USP39-208ENST00000455732 FBXO32Q969P5 355 aa18.33■□□□□ 0.52
USP39-208ENST00000455732 FAM83CQ9BQN1 747 aa18.33■□□□□ 0.52
USP39-208ENST00000455732 FBXO44Q9H4M3 255 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms