RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 PRR29P0C7W0 189 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 SLC6A11P48066 632 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 IFNAR2P48551 515 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 SNRPFP62306 86 aaKnown RBP17.09■□□□□ 0.33
GPC1-206ENST00000455111 ORC1Q13415 861 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 KMT5BQ4FZB7 885 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 PLA2G2CQ5R387 149 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 HS2ST1Q7LGA3 356 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 FILIP1Q7Z7B0 1213 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 CPA6Q8N4T0 437 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 B3GALNT2Q8NCR0 500 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 ATP2A3Q93084 1043 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 CEP295NLQ96MC4 621 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 FNBP1Q96RU3 617 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 RTKNQ9BST9 563 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 DUSP15Q9H1R2 295 aaPredicted RBP17.09■□□□□ 0.33
GPC1-206ENST00000455111 SNX25Q9H3E2 840 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 SMPD4Q9NXE4 827 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 HPSEQ9Y251 543 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 CPQQ9Y646 472 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 NUP205Q92621 2012 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 TM4SF5O14894 197 aa17.08■□□□□ 0.32
GPC1-206ENST00000455111 TRIM66O15016 1216 aa17.08■□□□□ 0.32
GPC1-206ENST00000455111 RPP40O75818 363 aaKnown RBP17.08■□□□□ 0.32
GPC1-206ENST00000455111 ME1P48163 572 aa17.08■□□□□ 0.32
GPC1-206ENST00000455111 KCNB1Q14721 858 aa17.08■□□□□ 0.32
GPC1-206ENST00000455111 MAPRE1Q15691 268 aaKnown RBP17.08■□□□□ 0.32
GPC1-206ENST00000455111 SYT13Q7L8C5 426 aa17.08■□□□□ 0.32
GPC1-206ENST00000455111 ADGRG2Q8IZP9 1017 aa17.08■□□□□ 0.32
GPC1-206ENST00000455111 PHTF2Q8N3S3 785 aa17.08■□□□□ 0.32
GPC1-206ENST00000455111 SCAMP5Q8TAC9 235 aa17.08■□□□□ 0.32
GPC1-206ENST00000455111 USP33Q8TEY7 942 aa17.08■□□□□ 0.32
GPC1-206ENST00000455111 TMEM174Q8WUU8 243 aa17.08■□□□□ 0.32
GPC1-206ENST00000455111 ZC3H10Q96K80 434 aaKnown RBP17.08■□□□□ 0.32
GPC1-206ENST00000455111 IL37Q9NZH6 218 aa17.08■□□□□ 0.32
GPC1-206ENST00000455111 TRPM5Q9NZQ8 1165 aa17.08■□□□□ 0.32
GPC1-206ENST00000455111 MYH10P35580 1976 aa17.08■□□□□ 0.32
GPC1-206ENST00000455111 SDK1Q7Z5N4 2213 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 A0A1B0GVL5 298 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 A8MXQ7 604 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 EXOC3O60645 756 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 SLFN14P0C7P3 912 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 PFKFB1P16118 471 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 TNNC1P63316 161 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 IFRD2Q12894 506 aaPredicted RBP17.07■□□□□ 0.32
GPC1-206ENST00000455111 DMC1Q14565 340 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 PLK5Q496M5 336 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 SPOPLQ6IQ16 392 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 RHBDF2Q6PJF5 856 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 SCARA5Q6ZMJ2 495 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 CEP68Q76N32 757 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 FAM35AQ86V20 835 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 FUKQ8N0W3 1084 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 FSIP1Q8NA03 581 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 NETO1Q8TDF5 533 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 CNTNAP3BQ96NU0 1288 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 TWNKQ96RR1 684 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 SMOQ99835 787 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 CNTNAP3Q9BZ76 1288 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 HCN2Q9UL51 889 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 SLC8A2Q9UPR5 921 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 PLXND1Q9Y4D7 1925 aa17.07■□□□□ 0.32
GPC1-206ENST00000455111 COCHO43405 550 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 ATG13O75143 517 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 ZDHHC11BP0C7U3 371 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 ANXA13P27216 316 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 ATICP31939 592 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 SEC13P55735 322 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 DHCR24Q15392 516 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 TCEAL6Q6IPX3 200 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 TMEM92Q6UXU6 159 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 SLC9A9Q8IVB4 645 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 CAMKK1Q8N5S9 505 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 TCEAL3Q969E4 200 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 P2RY11Q96G91 374 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 ELOVL4Q9GZR5 314 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 ZDHHC4Q9NPG8 344 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 FAM13BQ9NYF5 915 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 CHORDC1Q9UHD1 332 aaPredicted RBP17.06■□□□□ 0.32
GPC1-206ENST00000455111 INVSQ9Y283 1065 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 ABCA7Q8IZY2 2146 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 THADAQ6YHU6 1953 aa17.06■□□□□ 0.32
GPC1-206ENST00000455111 FAM92AA1XBS5 289 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 GREM1O60565 184 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 CCDC130P13994 396 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 PFKLP17858 780 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 BCKDHBP21953 392 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 TRPC3Q13507 836 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 NCOA4Q13772 614 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 ZNF699Q32M78 642 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 ZACNQ401N2 412 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 FBXO43Q4G163 708 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 EMC10Q5UCC4 262 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 GPRIN1Q7Z2K8 1008 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 CACNA2D4Q7Z3S7 1137 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 ACOT1Q86TX2 421 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 RASSF3Q86WH2 238 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 NUP93Q8N1F7 819 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 SYAP1Q96A49 352 aaPredicted RBP17.05■□□□□ 0.32
GPC1-206ENST00000455111 CCSER2Q9H7U1 834 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms