RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 KAT5Q92993 513 aa26.34■■□□□ 1.81
MSH2-203ENST00000454849 TMEM176AQ96HP8 235 aa26.34■■□□□ 1.81
MSH2-203ENST00000454849 RNF38Q9H0F5 515 aa26.34■■□□□ 1.81
MSH2-203ENST00000454849 THG1LQ9NWX6 298 aaKnown RBP26.34■■□□□ 1.81
MSH2-203ENST00000454849 GMIPQ9P107 970 aa26.34■■□□□ 1.81
MSH2-203ENST00000454849 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.34■■□□□ 1.81
MSH2-203ENST00000454849 F5P12259 2224 aa26.34■■□□□ 1.81
MSH2-203ENST00000454849 NUP210Q8TEM1 1887 aaPredicted RBP26.34■■□□□ 1.81
MSH2-203ENST00000454849 SCAMP3O14828 347 aaKnown RBP26.33■■□□□ 1.81
MSH2-203ENST00000454849 NHLH1Q02575 133 aa26.33■■□□□ 1.81
MSH2-203ENST00000454849 CLEC20AQ6ZU45 233 aa26.33■■□□□ 1.81
MSH2-203ENST00000454849 MLKLQ8NB16 471 aa26.33■■□□□ 1.81
MSH2-203ENST00000454849 SLITRK1Q96PX8 696 aa26.33■■□□□ 1.81
MSH2-203ENST00000454849 PHOX2BQ99453 314 aa26.33■■□□□ 1.81
MSH2-203ENST00000454849 KCNH6Q9H252 994 aa26.33■■□□□ 1.81
MSH2-203ENST00000454849 EBF3Q9H4W6 596 aa26.33■■□□□ 1.81
MSH2-203ENST00000454849 SMPD4Q9NXE4 827 aa26.33■■□□□ 1.81
MSH2-203ENST00000454849 EHD2Q9NZN4 543 aa26.33■■□□□ 1.81
MSH2-203ENST00000454849 ZMYM5Q9UJ78 669 aa26.33■■□□□ 1.81
MSH2-203ENST00000454849 ARIH1Q9Y4X5 557 aaPredicted RBP26.33■■□□□ 1.81
MSH2-203ENST00000454849 RTN3O95197 1032 aaPredicted RBP26.32■■□□□ 1.8
MSH2-203ENST00000454849 GNA14O95837 355 aa26.32■■□□□ 1.8
MSH2-203ENST00000454849 ARSAP15289 507 aa26.32■■□□□ 1.8
MSH2-203ENST00000454849 TRIM21P19474 475 aaKnown RBP26.32■■□□□ 1.8
MSH2-203ENST00000454849 PLA2G5P39877 138 aa26.32■■□□□ 1.8
MSH2-203ENST00000454849 ZXDBP98169 803 aa26.32■■□□□ 1.8
MSH2-203ENST00000454849 RRAGAQ7L523 313 aa26.32■■□□□ 1.8
MSH2-203ENST00000454849 SH3RF2Q8TEC5 729 aa26.32■■□□□ 1.8
MSH2-203ENST00000454849 FAM3CQ92520 227 aa26.32■■□□□ 1.8
MSH2-203ENST00000454849 CSNK1G1Q9HCP0 422 aa26.32■■□□□ 1.8
MSH2-203ENST00000454849 DLGAP2Q9P1A6 1054 aa26.32■■□□□ 1.8
MSH2-203ENST00000454849 ANAPC1Q9H1A4 1944 aa26.31■■□□□ 1.8
MSH2-203ENST00000454849 FGFR1OPO95684 399 aaKnown RBP26.31■■□□□ 1.8
MSH2-203ENST00000454849 CALCAP01258 141 aa26.31■■□□□ 1.8
MSH2-203ENST00000454849 CCDC192P0DO97 292 aa26.31■■□□□ 1.8
MSH2-203ENST00000454849 PTPN5P54829 565 aa26.31■■□□□ 1.8
MSH2-203ENST00000454849 HSP90AA4PQ58FG1 418 aa26.31■■□□□ 1.8
MSH2-203ENST00000454849 IRF2BP1Q8IU81 584 aa26.31■■□□□ 1.8
MSH2-203ENST00000454849 ARHGEF19Q8IW93 802 aa26.31■■□□□ 1.8
MSH2-203ENST00000454849 LMO3Q8TAP4 145 aa26.31■■□□□ 1.8
MSH2-203ENST00000454849 CNOT6LQ96LI5 555 aaKnown RBP26.31■■□□□ 1.8
MSH2-203ENST00000454849 NT5C1BQ96P26 610 aa26.31■■□□□ 1.8
MSH2-203ENST00000454849 TRPV5Q9NQA5 729 aa26.31■■□□□ 1.8
MSH2-203ENST00000454849 WNT6Q9Y6F9 365 aa26.31■■□□□ 1.8
MSH2-203ENST00000454849 MYH10P35580 1976 aa26.31■■□□□ 1.8
MSH2-203ENST00000454849 OTOL1A6NHN0 477 aaPredicted RBP26.3■■□□□ 1.8
MSH2-203ENST00000454849 SOBPA7XYQ1 873 aa26.3■■□□□ 1.8
MSH2-203ENST00000454849 HHLA1C9JL84 531 aa26.3■■□□□ 1.8
MSH2-203ENST00000454849 AFPP02771 609 aaKnown RBP26.3■■□□□ 1.8
MSH2-203ENST00000454849 TPD52L1Q16890 204 aaPredicted RBP26.3■■□□□ 1.8
MSH2-203ENST00000454849 CC2D1AQ6P1N0 951 aaPredicted RBP26.3■■□□□ 1.8
MSH2-203ENST00000454849 TXNDC11Q6PKC3 985 aa26.3■■□□□ 1.8
MSH2-203ENST00000454849 PPM1KQ8N3J5 372 aa26.3■■□□□ 1.8
MSH2-203ENST00000454849 ATOH1Q92858 354 aaPredicted RBP26.3■■□□□ 1.8
MSH2-203ENST00000454849 PRRX2Q99811 253 aa26.3■■□□□ 1.8
MSH2-203ENST00000454849 FAM83CQ9BQN1 747 aa26.3■■□□□ 1.8
MSH2-203ENST00000454849 CRACR2AQ9BSW2 395 aa26.3■■□□□ 1.8
MSH2-203ENST00000454849 HPS4Q9NQG7 708 aa26.3■■□□□ 1.8
MSH2-203ENST00000454849 CD19P15391 556 aa26.29■■□□□ 1.8
MSH2-203ENST00000454849 ACO1P21399 889 aaKnown RBP26.29■■□□□ 1.8
MSH2-203ENST00000454849 MARSP56192 900 aaKnown RBP26.29■■□□□ 1.8
MSH2-203ENST00000454849 ZNF268Q14587 947 aaPredicted RBP26.29■■□□□ 1.8
MSH2-203ENST00000454849 MTF1Q14872 753 aa26.29■■□□□ 1.8
MSH2-203ENST00000454849 ZNF77Q15935 545 aa26.29■■□□□ 1.8
MSH2-203ENST00000454849 EHBP1Q8NDI1 1231 aa26.29■■□□□ 1.8
MSH2-203ENST00000454849 FAXDC2Q96IV6 333 aa26.29■■□□□ 1.8
MSH2-203ENST00000454849 DUSP16Q9BY84 665 aa26.29■■□□□ 1.8
MSH2-203ENST00000454849 INTS2Q9H0H0 1204 aaKnown RBP26.29■■□□□ 1.8
MSH2-203ENST00000454849 LINC00597Q9H2U6 94 aa26.29■■□□□ 1.8
MSH2-203ENST00000454849 CCSER2Q9H7U1 834 aa26.29■■□□□ 1.8
MSH2-203ENST00000454849 KIF9Q9HAQ2 790 aa26.29■■□□□ 1.8
MSH2-203ENST00000454849 IL37Q9NZH6 218 aa26.29■■□□□ 1.8
MSH2-203ENST00000454849 PCDHB4Q9Y5E5 795 aa26.29■■□□□ 1.8
MSH2-203ENST00000454849 CPQQ9Y646 472 aa26.29■■□□□ 1.8
MSH2-203ENST00000454849 COL4A2P08572 1712 aa26.28■■□□□ 1.8
MSH2-203ENST00000454849 SPECC1L-ADORA2AF8WAN1 911 aa26.28■■□□□ 1.8
MSH2-203ENST00000454849 MAN2B1O00754 1011 aa26.28■■□□□ 1.8
MSH2-203ENST00000454849 CYP26A1O43174 497 aa26.28■■□□□ 1.8
MSH2-203ENST00000454849 PPP3CCP48454 512 aa26.28■■□□□ 1.8
MSH2-203ENST00000454849 PLCB2Q00722 1185 aa26.28■■□□□ 1.8
MSH2-203ENST00000454849 CETN1Q12798 172 aa26.28■■□□□ 1.8
MSH2-203ENST00000454849 FZD5Q13467 585 aa26.28■■□□□ 1.8
MSH2-203ENST00000454849 ANGPT1Q15389 498 aa26.28■■□□□ 1.8
MSH2-203ENST00000454849 ITPRIPL2Q3MIP1 535 aa26.28■■□□□ 1.8
MSH2-203ENST00000454849 DNAI2Q9GZS0 605 aa26.28■■□□□ 1.8
MSH2-203ENST00000454849 DUS2Q9NX74 493 aaKnown RBP26.28■■□□□ 1.8
MSH2-203ENST00000454849 ARHGAP26Q9UNA1 814 aa26.28■■□□□ 1.8
MSH2-203ENST00000454849 MRPS17Q9Y2R5 130 aaKnown RBP26.28■■□□□ 1.8
MSH2-203ENST00000454849 CACNA1HO95180 2353 aa26.28■■□□□ 1.8
MSH2-203ENST00000454849 RNF225M0QZC1 329 aaPredicted RBP26.27■■□□□ 1.8
MSH2-203ENST00000454849 LEFTY2O00292 366 aa26.27■■□□□ 1.8
MSH2-203ENST00000454849 PMM2O15305 246 aa26.27■■□□□ 1.8
MSH2-203ENST00000454849 COCHO43405 550 aa26.27■■□□□ 1.8
MSH2-203ENST00000454849 OAS1P00973 400 aaKnown RBP26.27■■□□□ 1.8
MSH2-203ENST00000454849 MBL2P11226 248 aaPredicted RBP26.27■■□□□ 1.8
MSH2-203ENST00000454849 APBA1Q02410 837 aa26.27■■□□□ 1.8
MSH2-203ENST00000454849 GOLGA7BQ2TAP0 167 aa26.27■■□□□ 1.8
MSH2-203ENST00000454849 TMEM270Q6UE05 265 aa26.27■■□□□ 1.8
MSH2-203ENST00000454849 TTC39CQ8N584 583 aa26.27■■□□□ 1.8
MSH2-203ENST00000454849 UBR7Q8N806 425 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms