RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 PLPPR4Q7Z2D5 763 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 SEC14L1Q92503 715 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 CDHR5Q9HBB8 845 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 TXNDC16Q9P2K2 825 aa12.51□□□□□ -0.41
SMPD4-213ENST00000454468 SIGLEC16A6NMB1 481 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 BTBD19C9JJ37 291 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 ALDH3A1P30838 453 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 RPA3P35244 121 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-213ENST00000454468 MPP2Q14168 576 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 DGKDQ16760 1214 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 RFX8Q6ZV50 586 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 KDELC2Q7Z4H8 507 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 ATP11CQ8NB49 1132 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 CCHCR1Q8TD31 782 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 PLCD4Q9BRC7 762 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 TRIM56Q9BRZ2 755 aaKnown RBP12.5□□□□□ -0.41
SMPD4-213ENST00000454468 DPEP3Q9H4B8 488 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 NOD1Q9Y239 953 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 STYXL1Q9Y6J8 313 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 EVPLQ92817 2033 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 H0Y3Z8 333 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 HUS1O60921 280 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 RECQL4O94761 1208 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 C22orf31O95567 290 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 RBL1P28749 1068 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 PMF1Q6P1K2 205 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 ALLCQ8N6M5 410 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 TTC13Q8NBP0 860 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 SYT17Q9BSW7 474 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 AP5M1Q9H0R1 490 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 XYLT2Q9H1B5 865 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 ETNK1Q9HBU6 452 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 SLC24A3Q9HC58 644 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 BARX2Q9UMQ3 279 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-213ENST00000454468 ADGRA2Q96PE1 1338 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 GREB1LQ9C091 1923 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-213ENST00000454468 CLDN5O00501 218 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 VDRP11473 427 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 GNL1P36915 607 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-213ENST00000454468 SESN3P58005 492 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 MXRA7P84157 204 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 TAP1Q03518 808 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 PPIL2Q13356 520 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 TFDP2Q14188 446 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 ANKRD20A8PQ5CZ79 823 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 MDH1BQ5I0G3 518 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 ZNF484Q5JVG2 852 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 NOL9Q5SY16 702 aaKnown RBP12.5□□□□□ -0.41
SMPD4-213ENST00000454468 FNBP1LQ5T0N5 605 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 MTHFD1LQ6UB35 978 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 ILDR2Q71H61 639 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 XYLT1Q86Y38 959 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 FZD8Q9H461 694 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 IFT122Q9HBG6 1241 aa12.5□□□□□ -0.41
SMPD4-213ENST00000454468 APOL1O14791 398 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 GAS2O43903 313 aaKnown RBP12.49□□□□□ -0.41
SMPD4-213ENST00000454468 SNCBQ16143 134 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 FYB2Q5VWT5 728 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 PPP1R2P3Q6NXS1 205 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 PPIL6Q8IXY8 311 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 SIX6OS1Q8N1H7 587 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 MAML1Q92585 1016 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 ERP27Q96DN0 273 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 PAFAH2Q99487 392 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 QSER1Q2KHR3 1735 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 CNMDO75829 334 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 FAM155BO75949 473 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 MROH9Q5TGP6 573 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 ZCCHC9Q8N567 271 aaKnown RBP12.49□□□□□ -0.41
SMPD4-213ENST00000454468 SLC2A14Q8TDB8 520 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 KCNV2Q8TDN2 545 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 ZNF518BQ9C0D4 1074 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 SIK2Q9H0K1 926 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 I3L4J1 428 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 B4GALT4O60513 344 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 LPXNO60711 386 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 ADRA1DP25100 572 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 IVDP26440 423 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 ARL4AP40617 200 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 ARHGAP1Q07960 439 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 ACVR2BQ13705 512 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 CES3Q6UWW8 571 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 CEP128Q6ZU80 1094 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 ZFP42Q96MM3 310 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 RILPQ96NA2 401 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 FAM111AQ96PZ2 611 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 WDR35Q9P2L0 1181 aa12.49□□□□□ -0.41
SMPD4-213ENST00000454468 ZC3H7BQ9UGR2 993 aaKnown RBP12.49□□□□□ -0.41
SMPD4-213ENST00000454468 ZBTB42B2RXF5 422 aa12.48□□□□□ -0.41
SMPD4-213ENST00000454468 KBTBD13C9JR72 458 aa12.48□□□□□ -0.41
SMPD4-213ENST00000454468 PIGRP01833 764 aa12.48□□□□□ -0.41
SMPD4-213ENST00000454468 MCF2P10911 925 aa12.48□□□□□ -0.41
SMPD4-213ENST00000454468 SMPD1P17405 629 aa12.48□□□□□ -0.41
SMPD4-213ENST00000454468 AMPD1P23109 780 aa12.48□□□□□ -0.41
SMPD4-213ENST00000454468 LMO2P25791 158 aa12.48□□□□□ -0.41
SMPD4-213ENST00000454468 SARNPP82979 210 aaKnown RBP12.48□□□□□ -0.41
SMPD4-213ENST00000454468 PTP4A2Q12974 167 aa12.48□□□□□ -0.41
SMPD4-213ENST00000454468 PTK7Q13308 1070 aa12.48□□□□□ -0.41
SMPD4-213ENST00000454468 RCN2Q14257 317 aa12.48□□□□□ -0.41
SMPD4-213ENST00000454468 ZNF618Q5T7W0 954 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms