RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 FAM35AQ86V20 835 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 SLC4A11Q8NBS3 891 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 ATAD1Q8NBU5 361 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 RBBP8NLQ8NC74 664 aaPredicted RBP9.23□□□□□ -0.93
COL28A1-205ENST00000453441 ADAM32Q8TC27 787 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 SUSD6Q92537 303 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 SMG7Q92540 1137 aaKnown RBP9.23□□□□□ -0.93
COL28A1-205ENST00000453441 PSMG2Q969U7 264 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 CYFIP2Q96F07 1278 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 HEXIM2Q96MH2 286 aaKnown RBP9.23□□□□□ -0.93
COL28A1-205ENST00000453441 KREMEN1Q96MU8 473 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 TWNKQ96RR1 684 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 SEPT5Q99719 369 aaPredicted RBP9.23□□□□□ -0.93
COL28A1-205ENST00000453441 OCSTAMPQ9BR26 566 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 MED10Q9BTT4 135 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 NAA15Q9BXJ9 866 aaKnown RBP9.23□□□□□ -0.93
COL28A1-205ENST00000453441 UBXN6Q9BZV1 441 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 NUCKS1Q9H1E3 243 aaKnown RBP9.23□□□□□ -0.93
COL28A1-205ENST00000453441 S1PR5Q9H228 398 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 GANQ9H2C0 597 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 DPEP3Q9H4B8 488 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 PIDD1Q9HB75 910 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 DMAP1Q9NPF5 467 aaPredicted RBP9.23□□□□□ -0.93
COL28A1-205ENST00000453441 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.23□□□□□ -0.93
COL28A1-205ENST00000453441 TMLHEQ9NVH6 421 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 UXTQ9UBK9 157 aaPredicted RBP9.23□□□□□ -0.93
COL28A1-205ENST00000453441 HESX1Q9UBX0 185 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 HMGXB4Q9UGU5 601 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 NME7Q9Y5B8 376 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 ZFP37Q9Y6Q3 630 aaPredicted RBP9.23□□□□□ -0.93
COL28A1-205ENST00000453441 ITIH6Q6UXX5 1313 aa9.23□□□□□ -0.93
COL28A1-205ENST00000453441 MBTPS2O43462 519 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 ATP2C2O75185 946 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 NOL4O94818 638 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 RTN3O95197 1032 aaPredicted RBP9.22□□□□□ -0.93
COL28A1-205ENST00000453441 VNN2O95498 520 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 SPATA31D3P0C874 917 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 SETSIPP0DME0 302 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 CD19P15391 556 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 PTPN2P17706 415 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 GRIK1P39086 918 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 PPP3CCP48454 512 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 BCAT1P54687 386 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 EPHA5P54756 1037 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 MRPS5P82675 430 aaKnown RBP9.22□□□□□ -0.93
COL28A1-205ENST00000453441 DLX2Q07687 328 aaPredicted RBP9.22□□□□□ -0.93
COL28A1-205ENST00000453441 TWF1Q12792 350 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 RAPGEF1Q13905 1077 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 TRIM14Q14142 442 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 CBX2Q14781 532 aaPredicted RBP9.22□□□□□ -0.93
COL28A1-205ENST00000453441 SMAD2Q15796 467 aaKnown RBP9.22□□□□□ -0.93
COL28A1-205ENST00000453441 CNGA2Q16280 664 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 TAF12Q16514 161 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 ARHGAP44Q17R89 818 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 RARS2Q5T160 578 aaKnown RBP9.22□□□□□ -0.93
COL28A1-205ENST00000453441 CYP4A22Q5TCH4 519 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 DPY19L2P1Q6NXN4 242 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 LCLAT1Q6UWP7 414 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 TMC5Q6UXY8 1006 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 SPATA31D4Q6ZUB0 917 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 CACNA2D4Q7Z3S7 1137 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 FAM71AQ8IYT1 594 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 FUKQ8N0W3 1084 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 ANKRD52Q8NB46 1076 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 RNF214Q8ND24 703 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 SLC2A14Q8TDB8 520 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 ZNF707Q96C28 371 aaPredicted RBP9.22□□□□□ -0.93
COL28A1-205ENST00000453441 TRMT2BQ96GJ1 504 aaKnown RBP9.22□□□□□ -0.93
COL28A1-205ENST00000453441 MYRFLQ96LU7 910 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 GCNAQ96QF7 691 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 SPAG5Q96R06 1193 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 KLF16Q9BXK1 252 aaPredicted RBP9.22□□□□□ -0.93
COL28A1-205ENST00000453441 B3GNT5Q9BYG0 378 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 GPR88Q9GZN0 384 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 CSNK1G1Q9HCP0 422 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 WDR6Q9NNW5 1121 aaKnown RBP9.22□□□□□ -0.93
COL28A1-205ENST00000453441 ASAH2Q9NR71 780 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 KRT82Q9NSB4 513 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 FAM207AQ9NSI2 230 aaPredicted RBP9.22□□□□□ -0.93
COL28A1-205ENST00000453441 PRKAG3Q9UGI9 489 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 USTQ9Y2C2 406 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.22□□□□□ -0.93
COL28A1-205ENST00000453441 FHOD1Q9Y613 1164 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 CLUHO75153 1309 aa9.22□□□□□ -0.93
COL28A1-205ENST00000453441 MYH10P35580 1976 aa9.21□□□□□ -0.93
COL28A1-205ENST00000453441 A0A1W2PQJ5 194 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 F8VZ95 297 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 H3BQ06 376 aaPredicted RBP9.21□□□□□ -0.94
COL28A1-205ENST00000453441 O00370 1275 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 CCL16O15467 120 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 HCRTO43612 131 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 RFPL2O75678 378 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 CCDC130P13994 396 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 NPR3P17342 541 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 PFKLP17858 780 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 ATF6P18850 670 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 BDNFP23560 247 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 CYP2F1P24903 491 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 DDX6P26196 483 aaKnown RBP eCLIP9.21□□□□□ -0.94
COL28A1-205ENST00000453441 CDC25CP30307 473 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms