RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 SLC39A14Q15043 492 aa9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 SURF1Q15526 300 aa9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 MAPRE1Q15691 268 aaKnown RBP9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 E2F4Q16254 413 aa9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 DUOXA2Q1HG44 320 aa9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 ANO7Q6IWH7 933 aa9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 TMEM92Q6UXU6 159 aa9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 EPM2AIP1Q7L775 607 aaPredicted RBP9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 TRAPPC11Q7Z392 1133 aa9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 C12orf40Q86WS4 652 aa9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 CCDC65Q8IXS2 484 aa9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 CCDC33Q8N5R6 958 aa9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 CNOT6LQ96LI5 555 aaKnown RBP9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 GZF1Q9H116 711 aaPredicted RBP9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 UPF2Q9HAU5 1272 aaKnown RBP9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 SMPD4Q9NXE4 827 aa9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 TRPM5Q9NZQ8 1165 aa9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 CPQQ9Y646 472 aa9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 PCDH15Q96QU1 1955 aa9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 IGF2RP11717 2491 aa9.42□□□□□ -0.9
DEPDC1B-202ENST00000453022 C4orf47A7E2U8 309 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 TRIM66O15016 1216 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 TGFB1I1O43294 461 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 CST3P01034 146 aaPredicted RBP9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 CD44P16070 742 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 ANXA13P27216 316 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 SLC6A11P48066 632 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 TAF10Q12962 218 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 DHCR24Q15392 516 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 CRY1Q16526 586 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 SNRNP35Q16560 246 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 USP39Q53GS9 565 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 ADGRG2Q8IZP9 1017 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 ALLCQ8N6M5 410 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 OLIG1Q8TAK6 271 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 ZFRQ96KR1 1074 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 C8orf48Q96LL4 319 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 MMS19Q96T76 1030 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 CGRRF1Q99675 332 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 TRIM9Q9C026 710 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 ZNF518BQ9C0D4 1074 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 TNMDQ9H2S6 317 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 AGPAT3Q9NRZ7 376 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 KBTBD4Q9NVX7 518 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 WASF3Q9UPY6 502 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 MTMR6Q9Y217 621 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 LAMA5O15230 3695 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 ITPR1Q14643 2758 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 SGK1O00141 431 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 CLDN5O00501 218 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 CDX4O14627 284 aaPredicted RBP9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 EIF3DO15371 548 aaKnown RBP eCLIP9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 TACC1O75410 805 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 DLATP10515 647 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 PTPN1P18031 435 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 GNL1P36915 607 aaPredicted RBP9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 NASPP49321 788 aaPredicted RBP9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 NOVA1P51513 510 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 RHBDF2Q6PJF5 856 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 HS2ST1Q7LGA3 356 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 CYP2U1Q7Z449 544 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 C11orf74Q86VG3 221 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 PHTF2Q8N3S3 785 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 FRMD1Q8N878 549 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 KIAA1958Q8N8K9 716 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 IL17RCQ8NAC3 791 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 RDH13Q8NBN7 331 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 TXNDC5Q8NBS9 432 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 CCDC26Q8TAB7 109 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 ZNF507Q8TCN5 953 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 ZNF516Q92618 1163 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 B3GNT5Q9BYG0 378 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 SNX25Q9H3E2 840 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 ZDHHC4Q9NPG8 344 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 CFAP97Q9P2B7 532 aa9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 R3HCC1Q9Y3T6 440 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-202ENST00000453022 CLIC2O15247 247 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 ADAM23O75077 832 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 KAT7O95251 611 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 KLF8O95600 359 aaPredicted RBP9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 ABL1P00519 1130 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 TIE1P35590 1138 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 EIF2DP41214 584 aaKnown RBP9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 P2RY2P41231 377 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 KIR2DL1P43626 348 aaPredicted RBP9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 PPP3CCP48454 512 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 CYP2J2P51589 502 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 CLCN6P51797 869 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 MRPS21P82921 87 aaKnown RBP9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 KDSRQ06136 332 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 CYP24A1Q07973 514 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 EHHADHQ08426 723 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 ZNF252P-AS1Q0IIN9 211 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 IFRD2Q12894 506 aaPredicted RBP9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 PSMD6Q15008 389 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 WDR72Q3MJ13 1102 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 SH3PXD2AQ5TCZ1 1133 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 EMC10Q5UCC4 262 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 STXBP4Q6ZWJ1 553 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 LINC00301Q8NCQ3 95 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms