RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 NSUN6Q8TEA1 469 aaKnown RBP13.14□□□□□ -0.31
THUMPD3-206ENST00000452837 SH3TC2Q8TF17 1288 aa13.14□□□□□ -0.31
THUMPD3-206ENST00000452837 OXNAD1Q96HP4 312 aaPredicted RBP13.14□□□□□ -0.31
THUMPD3-206ENST00000452837 APOPT1Q96IL0 206 aa13.14□□□□□ -0.31
THUMPD3-206ENST00000452837 ZBED3Q96IU2 234 aaPredicted RBP13.14□□□□□ -0.31
THUMPD3-206ENST00000452837 NXF1Q9UBU9 619 aaKnown RBP13.14□□□□□ -0.31
THUMPD3-206ENST00000452837 HMGXB4Q9UGU5 601 aa13.14□□□□□ -0.31
THUMPD3-206ENST00000452837 STRIP2Q9ULQ0 834 aa13.14□□□□□ -0.31
THUMPD3-206ENST00000452837 TEX264Q9Y6I9 313 aa13.14□□□□□ -0.31
THUMPD3-206ENST00000452837 CCDC195A0A1B0GUA6 201 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 H0YCG3 227 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 DNAJC6O75061 913 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 LDHAP00338 332 aaKnown RBP13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 RARBP10826 455 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 YY1P25490 414 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 MIPP30301 263 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 VHLP40337 213 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 IRX1P78414 480 aaPredicted RBP13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 TFAMQ00059 246 aaKnown RBP13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 KLC1Q07866 573 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 THOC5Q13769 683 aaKnown RBP13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 RCN2Q14257 317 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 TMEM132BQ14DG7 1078 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 GNPTABQ3T906 1256 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 CMPK2Q5EBM0 449 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 VPS52Q8N1B4 723 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 KCTD6Q8NC69 237 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 SPATA18Q8TC71 538 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 CFAP36Q96G28 342 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 TWNKQ96RR1 684 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 CYTH2Q99418 400 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 PCYT2Q99447 389 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 TCHPQ9BT92 498 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 CALN1Q9BXU9 219 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 C20orf27Q9GZN8 174 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 XYLT2Q9H1B5 865 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 ASCC2Q9H1I8 757 aaPredicted RBP13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 ZNF302Q9NR11 478 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 SMYD2Q9NRG4 433 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 KRT82Q9NSB4 513 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 MARCOQ9UEW3 520 aaPredicted RBP13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 ZNF214Q9UL59 606 aaPredicted RBP13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 MAFBQ9Y5Q3 323 aaPredicted RBP13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 MAFGO15525 162 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 ESRRAP11474 423 aaPredicted RBP13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 EIF4BP23588 611 aaKnown RBP13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 ZNF200P98182 395 aaPredicted RBP13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 BMPR2Q13873 1038 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 TSNAXIP1Q2TAA8 658 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 FOXB2Q5VYV0 432 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 LRRC74BQ6ZQY2 392 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 CHSY1Q86X52 802 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 MCUR1Q96AQ8 359 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 SRPK1Q96SB4 655 aaKnown RBP13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 STOML1Q9UBI4 398 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 PCDHGC3Q9UN70 934 aa13.13□□□□□ -0.31
THUMPD3-206ENST00000452837 TRIM49D1C9J1S8 452 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 DKC1O60832 514 aaKnown RBP eCLIP13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 KITP10721 976 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 INHBEP58166 350 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 MRPS5P82675 430 aaKnown RBP13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 MXRA7P84157 204 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 XYLT1Q86Y38 959 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 ALKBH8Q96BT7 664 aaKnown RBP13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 SDCBP2Q9H190 292 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 RPL26L1Q9UNX3 145 aaKnown RBP13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 MTO1Q9Y2Z2 717 aaKnown RBP13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 BRWD3Q6RI45 1802 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 ENO1P06733 434 aaKnown RBP13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 INHBAP08476 426 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 RXRBP28702 533 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 MRPS35P82673 323 aaKnown RBP13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 KCNJ11Q14654 390 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 OR52E8Q6IFG1 317 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 TRNP1Q6NT89 227 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 XRRA1Q6P2D8 792 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 WDR49Q8IV35 697 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 TMEM192Q8IY95 271 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 PPM1NQ8N819 430 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 SLC7A3Q8WY07 619 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 PIWIL1Q96J94 861 aaKnown RBP13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 ACAP3Q96P50 834 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 TTLL3Q9Y4R7 772 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 KAT6AQ92794 2004 aa13.12□□□□□ -0.31
THUMPD3-206ENST00000452837 H3BRJ5 948 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 APOC4-APOC2K7ER74 178 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 ADCY3O60266 1144 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 MSCO60682 206 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 APOC2P02655 101 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 HOXC6P09630 235 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 SATB1Q01826 763 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 CNTN2Q02246 1040 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 SLC34A1Q06495 639 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 CXCL9Q07325 125 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 BST1Q10588 318 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 ZNF699Q32M78 642 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 PRAMEF18Q5VWM3 479 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 C1orf228Q6PIY5 440 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 CYP4V2Q6ZWL3 525 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms