RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 ARHGAP17Q68EM7 881 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 ENOSF1Q7L5Y1 443 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 ZMIZ2Q8NF64 920 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 SMARCD2Q92925 531 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 SLITRK6Q9H5Y7 841 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 TASP1Q9H6P5 420 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 TRPV4Q9HBA0 871 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 UBE2TQ9NPD8 197 aaPredicted RBP21.12■□□□□ 0.97
COL9A3-202ENST00000452372 ZMYM5Q9UJ78 669 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 KIAA1257Q9ULG3 409 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 PCDHB4Q9Y5E5 795 aa21.12■□□□□ 0.97
COL9A3-202ENST00000452372 OBSL1O75147 1896 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 TNFRSF10BO14763 440 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 ECI2O75521 394 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 BEST1O76090 585 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 RTN3O95197 1032 aaPredicted RBP21.11■□□□□ 0.97
COL9A3-202ENST00000452372 DDX6P26196 483 aaKnown RBP eCLIP21.11■□□□□ 0.97
COL9A3-202ENST00000452372 WEE1P30291 646 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 MAP3K7CLP57077 242 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 CYP4F8P98187 520 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 KRT31Q15323 416 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 ANGPT1Q15389 498 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 TANGO2Q6ICL3 276 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 TMEM270Q6UE05 265 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 CLEC20AQ6ZU45 233 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 ZSCAN18Q8TBC5 510 aaPredicted RBP21.11■□□□□ 0.97
COL9A3-202ENST00000452372 MRPS31Q92665 395 aaKnown RBP21.11■□□□□ 0.97
COL9A3-202ENST00000452372 DUSP16Q9BY84 665 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 ARHGEF3Q9NR81 526 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 IL37Q9NZH6 218 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 APEX2Q9UBZ4 518 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 COL4A3Q01955 1670 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 ZNF292O60281 2723 aa21.11■□□□□ 0.97
COL9A3-202ENST00000452372 RNF225M0QZC1 329 aaPredicted RBP21.1■□□□□ 0.97
COL9A3-202ENST00000452372 STK25O00506 426 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 TADA3O75528 432 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 PAEPP09466 180 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 GLULP15104 373 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 ZNF18P17022 549 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 FCARP24071 287 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 STARD6P59095 220 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 SGO2Q562F6 1265 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 AOPEPQ8N6M6 819 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 ELSPBP1Q96BH3 223 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 SLC46A2Q9BY10 475 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 PLA2G2FQ9BZM2 168 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 HSD3B7Q9H2F3 369 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 ZFP14Q9HCL3 533 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 COMMD8Q9NX08 183 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 TAB2Q9NYJ8 693 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 CNTN6Q9UQ52 1028 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 F5P12259 2224 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 ANAPC1Q9H1A4 1944 aa21.1■□□□□ 0.97
COL9A3-202ENST00000452372 PRR23AA6NEV1 266 aa21.09■□□□□ 0.97
COL9A3-202ENST00000452372 SMTNL1A8MU46 457 aa21.09■□□□□ 0.97
COL9A3-202ENST00000452372 PES1O00541 588 aaKnown RBP21.09■□□□□ 0.97
COL9A3-202ENST00000452372 DCNP07585 359 aaKnown RBP21.09■□□□□ 0.97
COL9A3-202ENST00000452372 VDRP11473 427 aa21.09■□□□□ 0.97
COL9A3-202ENST00000452372 YWHAQP27348 245 aa21.09■□□□□ 0.97
COL9A3-202ENST00000452372 PPP3CCP48454 512 aa21.09■□□□□ 0.97
COL9A3-202ENST00000452372 ZNF165P49910 485 aa21.09■□□□□ 0.97
COL9A3-202ENST00000452372 MFAP3P55082 362 aa21.09■□□□□ 0.97
COL9A3-202ENST00000452372 KCNMA1Q12791 1236 aa21.09■□□□□ 0.97
COL9A3-202ENST00000452372 SMYD5Q6GMV2 418 aa21.09■□□□□ 0.97
COL9A3-202ENST00000452372 MON1AQ86VX9 555 aa21.09■□□□□ 0.97
COL9A3-202ENST00000452372 ARID3BQ8IVW6 561 aaPredicted RBP21.09■□□□□ 0.97
COL9A3-202ENST00000452372 ANKRD20A12PQ8NF67 263 aa21.09■□□□□ 0.97
COL9A3-202ENST00000452372 KXD1Q9BQD3 176 aa21.09■□□□□ 0.97
COL9A3-202ENST00000452372 DDX23Q9BUQ8 820 aaKnown RBP21.09■□□□□ 0.97
COL9A3-202ENST00000452372 VPS16Q9H269 839 aa21.09■□□□□ 0.97
COL9A3-202ENST00000452372 PNPLA8Q9NP80 782 aa21.09■□□□□ 0.97
COL9A3-202ENST00000452372 SIX2Q9NPC8 291 aa21.09■□□□□ 0.97
COL9A3-202ENST00000452372 LIMA1Q9UHB6 759 aaKnown RBP21.09■□□□□ 0.97
COL9A3-202ENST00000452372 FAM92AA1XBS5 289 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 LRRC10BA6NIK2 292 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 TPM2P07951 284 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 CD19P15391 556 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 CDK11BP21127 795 aaKnown RBP21.08■□□□□ 0.97
COL9A3-202ENST00000452372 ZNF132P52740 706 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 SLC5A3P53794 718 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 APBA1Q02410 837 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 TAF10Q12962 218 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 TXNDC8Q6A555 127 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 DPY19L2P1Q6NXN4 242 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 GJB7Q6PEY0 223 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 DHX40Q8IX18 779 aaKnown RBP21.08■□□□□ 0.97
COL9A3-202ENST00000452372 MAB21L3Q8N8X9 362 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 ANKRD52Q8NB46 1076 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 RBBP8NLQ8NC74 664 aaPredicted RBP21.08■□□□□ 0.97
COL9A3-202ENST00000452372 SCAMP5Q8TAC9 235 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 E2F7Q96AV8 911 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 SLITRK1Q96PX8 696 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 UBXN6Q9BZV1 441 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 FOXQ1Q9C009 403 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 TRPM5Q9NZQ8 1165 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 SIT1Q9Y3P8 196 aa21.08■□□□□ 0.97
COL9A3-202ENST00000452372 NUP210Q8TEM1 1887 aaPredicted RBP21.07■□□□□ 0.96
COL9A3-202ENST00000452372 HHLA1C9JL84 531 aa21.07■□□□□ 0.96
COL9A3-202ENST00000452372 VIPR2P41587 438 aa21.07■□□□□ 0.96
COL9A3-202ENST00000452372 COPB1P53618 953 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms