RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ABCA7Q8IZY2 2146 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 LINC00301Q8NCQ3 95 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 ZNF507Q8TCN5 953 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 USP33Q8TEY7 942 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 CNOT6LQ96LI5 555 aaKnown RBP11.61□□□□□ -0.55
USP1-204ENST00000452143 SLITRK1Q96PX8 696 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 FNBP1Q96RU3 617 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 CGRRF1Q99675 332 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 PANK2Q9BZ23 570 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 SNX25Q9H3E2 840 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 MMP17Q9ULZ9 603 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 FAM208BQ5VWN6 2430 aa11.61□□□□□ -0.55
USP1-204ENST00000452143 BCLAF3A2AJT9 711 aaKnown RBP11.6□□□□□ -0.55
USP1-204ENST00000452143 F8VP50 259 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 STX6O43752 255 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 OAS1P00973 400 aaKnown RBP11.6□□□□□ -0.55
USP1-204ENST00000452143 PDGFRBP09619 1106 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 DLATP10515 647 aaKnown RBP11.6□□□□□ -0.55
USP1-204ENST00000452143 TNNI1P19237 187 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 GBP1P32455 592 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 HOXD13P35453 343 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 GNL1P36915 607 aaPredicted RBP11.6□□□□□ -0.55
USP1-204ENST00000452143 DGKEP52429 567 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 ASIC1P78348 528 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 MRPS21P82921 87 aaKnown RBP11.6□□□□□ -0.55
USP1-204ENST00000452143 ZXDBP98169 803 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 CREB5Q02930 508 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 PSMD6Q15008 389 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 GAB4Q2WGN9 574 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 HSF5Q4G112 596 aaPredicted RBP11.6□□□□□ -0.55
USP1-204ENST00000452143 USP39Q53GS9 565 aaKnown RBP11.6□□□□□ -0.55
USP1-204ENST00000452143 MDH1BQ5I0G3 518 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 PMS2CLQ68D20 193 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 RNF43Q68DV7 783 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 HS2ST1Q7LGA3 356 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 IQUBQ8NA54 791 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 XXYLT1Q8NBI6 393 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 PDZD8Q8NEN9 1154 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 OVCA2Q8WZ82 227 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 HPS3Q969F9 1004 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 EDEM2Q9BV94 578 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 LSM14BQ9BX40 385 aaKnown RBP11.6□□□□□ -0.55
USP1-204ENST00000452143 LINC00597Q9H2U6 94 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 POLR3BQ9NW08 1133 aaPredicted RBP11.6□□□□□ -0.55
USP1-204ENST00000452143 CGNQ9P2M7 1197 aaKnown RBP11.6□□□□□ -0.55
USP1-204ENST00000452143 CPQQ9Y646 472 aa11.6□□□□□ -0.55
USP1-204ENST00000452143 MYOFQ9NZM1 2061 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.59□□□□□ -0.55
USP1-204ENST00000452143 K7EQS6 105 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 SPTLC2O15270 562 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 TGFB1I1O43294 461 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 KRT37O76014 449 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 YEATS4O95619 227 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 CAVIN2O95810 425 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 ADH1CP00326 375 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 ATICP31939 592 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 CYP24A1Q07973 514 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 EHHADHQ08426 723 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 CRY1Q16526 586 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 BMT2Q1RMZ1 405 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 WDR72Q3MJ13 1102 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 C2orf27AQ580R0 203 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 N4BP2L1Q5TBK1 243 aaPredicted RBP11.59□□□□□ -0.55
USP1-204ENST00000452143 TDRD10Q5VZ19 366 aaKnown RBP11.59□□□□□ -0.55
USP1-204ENST00000452143 TCEAL6Q6IPX3 200 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 ANO7Q6IWH7 933 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 UNC13DQ70J99 1090 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 FILIP1Q7Z7B0 1213 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 C12orf56Q8IXR9 622 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 ADGRG2Q8IZP9 1017 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 B3GALNT2Q8NCR0 500 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 MDGA1Q8NFP4 955 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 OR6B3Q8NGW1 331 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 TCEAL3Q969E4 200 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 SYAP1Q96A49 352 aaPredicted RBP11.59□□□□□ -0.55
USP1-204ENST00000452143 OTUB2Q96DC9 234 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 ZNF396Q96N95 335 aaPredicted RBP11.59□□□□□ -0.55
USP1-204ENST00000452143 DUSP9Q99956 384 aaKnown RBP11.59□□□□□ -0.55
USP1-204ENST00000452143 MRPL45Q9BRJ2 306 aaKnown RBP11.59□□□□□ -0.55
USP1-204ENST00000452143 SMOC1Q9H4F8 434 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 VRTNQ9H8Y1 702 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 TBC1D14Q9P2M4 693 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 MYH10P35580 1976 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 ATP8B3O60423 1300 aa11.59□□□□□ -0.55
USP1-204ENST00000452143 LNP1A1A4G5 178 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 A8MXQ7 604 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 K7ELQ4 463 aaPredicted RBP11.58□□□□□ -0.56
USP1-204ENST00000452143 DCLK1O15075 740 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 ZZEF1O43149 2961 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 CUTAO60888 179 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 ALDH1A2O94788 518 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 RTN3O95197 1032 aaPredicted RBP11.58□□□□□ -0.56
USP1-204ENST00000452143 KCNK5O95279 499 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 CST3P01034 146 aaPredicted RBP11.58□□□□□ -0.56
USP1-204ENST00000452143 PTPN1P18031 435 aaKnown RBP11.58□□□□□ -0.56
USP1-204ENST00000452143 TUBP50607 506 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 SEC13P55735 322 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 TAF10Q12962 218 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 TRPC3Q13507 836 aa11.58□□□□□ -0.56
USP1-204ENST00000452143 DHCR24Q15392 516 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms