RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 NR3C1P04150 777 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 KRT18P05783 430 aaKnown RBP8.98□□□□□ -0.97
LSM5-208ENST00000450169 TCF7P36402 384 aaPredicted RBP8.98□□□□□ -0.97
LSM5-208ENST00000450169 TRPC1P48995 793 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 CCT8P50990 548 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 ALDH18A1P54886 795 aaKnown RBP8.98□□□□□ -0.97
LSM5-208ENST00000450169 C21orf59P57076 290 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 RPS3AP61247 264 aaKnown RBP8.98□□□□□ -0.97
LSM5-208ENST00000450169 TRIM28Q13263 835 aaKnown RBP8.98□□□□□ -0.97
LSM5-208ENST00000450169 ATP1A4Q13733 1029 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 ARHGAP44Q17R89 818 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 RARS2Q5T160 578 aaKnown RBP8.98□□□□□ -0.97
LSM5-208ENST00000450169 RTKN2Q8IZC4 609 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 PQLC1Q8N2U9 271 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 TSPAN14Q8NG11 270 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 ZNF564Q8TBZ8 553 aaPredicted RBP8.98□□□□□ -0.97
LSM5-208ENST00000450169 CHPT1Q8WUD6 406 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 JDP2Q8WYK2 163 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 SLC5A5Q92911 643 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 TTC17Q96AE7 1141 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 TMIGD2Q96BF3 282 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 RANBP9Q96S59 729 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 NUF2Q9BZD4 464 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 C6orf203Q9P0P8 240 aaPredicted RBP8.98□□□□□ -0.97
LSM5-208ENST00000450169 DKK3Q9UBP4 350 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 RABGAP1Q9Y3P9 1069 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 SQORQ9Y6N5 450 aa8.98□□□□□ -0.97
LSM5-208ENST00000450169 E9PMD0 336 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 PDXKO00764 312 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 LPXNO60711 386 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 DGKIO75912 1065 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 SORBS2O94875 1100 aaKnown RBP8.97□□□□□ -0.97
LSM5-208ENST00000450169 TDP2O95551 362 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 ZBTB11O95625 1053 aaPredicted RBP8.97□□□□□ -0.97
LSM5-208ENST00000450169 PLA2G4BP0C869 781 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 DHRS4L1P0CG22 281 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 PABPC1P11940 636 aaKnown RBP8.97□□□□□ -0.97
LSM5-208ENST00000450169 SLC1A1P43005 524 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 CENPCQ03188 943 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 KCNC4Q03721 635 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 CD300CQ08708 224 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 ZYXQ15942 572 aaKnown RBP8.97□□□□□ -0.97
LSM5-208ENST00000450169 HSF5Q4G112 596 aaPredicted RBP8.97□□□□□ -0.97
LSM5-208ENST00000450169 RALGPS1Q5JS13 557 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 EFHC2Q5JST6 749 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 KBTBD6Q86V97 674 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 REXO1Q8N1G1 1221 aaKnown RBP8.97□□□□□ -0.97
LSM5-208ENST00000450169 GSDMBQ8TAX9 411 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 TRPC4APQ8TEL6 797 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 CSRNP1Q96S65 589 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 KLF6Q99612 283 aaPredicted RBP8.97□□□□□ -0.97
LSM5-208ENST00000450169 NUP85Q9BW27 656 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 PARVBQ9HBI1 364 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 APEX2Q9UBZ4 518 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 CDH22Q9UJ99 828 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 SYNPO2Q9UMS6 1093 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 POMPQ9Y244 141 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 TOGARAM1Q9Y4F4 1720 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 SPATA31A1Q5TZJ5 1347 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 KDM3AQ9Y4C1 1321 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 MCF2LO15068 1137 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 AOC1P19801 751 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 PRDX6P30041 224 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 HOXD13P35453 343 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 ETV4P43268 484 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 ALDH3B2P48448 385 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 PCYT1AP49585 367 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 BCAMP50895 628 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 KPNA1P52294 538 aaPredicted RBP8.97□□□□□ -0.97
LSM5-208ENST00000450169 DYNLL1P63167 89 aaKnown RBP8.97□□□□□ -0.97
LSM5-208ENST00000450169 DMPKQ09013 629 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 UBAP2LQ14157 1087 aaKnown RBP8.97□□□□□ -0.97
LSM5-208ENST00000450169 C6orf52Q5T4I8 152 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 SPOPLQ6IQ16 392 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 OGFOD2Q6N063 350 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 ZNF746Q6NUN9 644 aaPredicted RBP8.97□□□□□ -0.97
LSM5-208ENST00000450169 PGM2L1Q6PCE3 622 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 TPTE2Q6XPS3 522 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 MIER3Q7Z3K6 550 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 C14orf80Q86SX3 495 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 SEPT12Q8IYM1 358 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 RNF169Q8NCN4 708 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 ZCRB1Q8TBF4 217 aaKnown RBP8.97□□□□□ -0.97
LSM5-208ENST00000450169 ACTRT2Q8TDY3 377 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 CCDC127Q96BQ5 260 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 FAM111AQ96PZ2 611 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 HERPUD2Q9BSE4 406 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 IL17RBQ9NRM6 502 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 PPP1R1BQ9UD71 204 aaPredicted RBP8.97□□□□□ -0.97
LSM5-208ENST00000450169 STRIP2Q9ULQ0 834 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 MYH11P35749 1972 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 LAMB1P07942 1786 aa8.97□□□□□ -0.97
LSM5-208ENST00000450169 ASTN1O14525 1302 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 A0A1B0GTW7 788 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 F5H6K3 240 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 I3L4J1 428 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 FOXN3O00409 490 aaPredicted RBP8.96□□□□□ -0.97
LSM5-208ENST00000450169 KLF11O14901 512 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 ESRRBO95718 433 aa8.96□□□□□ -0.97
LSM5-208ENST00000450169 EIF2S1P05198 315 aaKnown RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms