RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 CCDC47Q96A33 483 aaKnown RBP13.14□□□□□ -0.31
MSH5-209ENST00000450148 LINC00597Q9H2U6 94 aa13.14□□□□□ -0.31
MSH5-209ENST00000450148 ECT2Q9H8V3 914 aa13.14□□□□□ -0.31
MSH5-209ENST00000450148 TRPM5Q9NZQ8 1165 aa13.14□□□□□ -0.31
MSH5-209ENST00000450148 WNT6Q9Y6F9 365 aa13.14□□□□□ -0.31
MSH5-209ENST00000450148 CFAP54Q96N23 3096 aa13.14□□□□□ -0.31
MSH5-209ENST00000450148 FAM92AA1XBS5 289 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 BEST1O76090 585 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 PPP3CCP48454 512 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 GCLMP48507 274 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 GALK1P51570 392 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 NDST1P52848 882 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 INCA1Q0VD86 236 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 ORC1Q13415 861 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 ADAM9Q13443 819 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 EDRF1Q3B7T1 1238 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 CC2D1AQ6P1N0 951 aaPredicted RBP13.13□□□□□ -0.31
MSH5-209ENST00000450148 UNC93AQ86WB7 457 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 FAM186BQ8IYM0 893 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 NUP93Q8N1F7 819 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 WHAMMQ8TF30 809 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 RUBCNQ92622 972 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 TNIP3Q96KP6 325 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 TWNKQ96RR1 684 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 SMOQ99835 787 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 CSNK1G1Q9HCP0 422 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 DUS2Q9NX74 493 aaKnown RBP13.13□□□□□ -0.31
MSH5-209ENST00000450148 EHD2Q9NZN4 543 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 SPAG17Q6Q759 2223 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 RALGAPA1Q6GYQ0 2036 aa13.13□□□□□ -0.31
MSH5-209ENST00000450148 LEFTY2O00292 366 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 EGFP01133 1207 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 ZDHHC11BP0C7U3 371 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 CCDC130P13994 396 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 YWHAQP27348 245 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 HOXA6P31267 233 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 PSMC2P35998 433 aaKnown RBP13.12□□□□□ -0.31
MSH5-209ENST00000450148 PIK3CAP42336 1068 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 PRCPP42785 496 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 PDE6CP51160 858 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 NRLP54845 237 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 NUCB2P80303 420 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 BECN1Q14457 450 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 COBLL1Q53SF7 1204 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 SNX30Q5VWJ9 437 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 ZC3H3Q8IXZ2 948 aaKnown RBP13.12□□□□□ -0.31
MSH5-209ENST00000450148 KIAA1958Q8N8K9 716 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 C12orf29Q8N999 325 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 SCAMP5Q8TAC9 235 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 SMARCD1Q96GM5 515 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 ZFRQ96KR1 1074 aaKnown RBP13.12□□□□□ -0.31
MSH5-209ENST00000450148 DMAP1Q9NPF5 467 aaPredicted RBP13.12□□□□□ -0.31
MSH5-209ENST00000450148 SMG5Q9UPR3 1016 aaKnown RBP13.12□□□□□ -0.31
MSH5-209ENST00000450148 CPQQ9Y646 472 aa13.12□□□□□ -0.31
MSH5-209ENST00000450148 MYO18AQ92614 2054 aaKnown RBP13.11□□□□□ -0.31
MSH5-209ENST00000450148 CHURC1-FNTBB4DL54 471 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 HRO43593 1189 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 AP1G2O75843 785 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 RTN3O95197 1032 aaPredicted RBP13.11□□□□□ -0.31
MSH5-209ENST00000450148 P4HA1P13674 534 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 TGM1P22735 817 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 RPL13P26373 211 aaKnown RBP13.11□□□□□ -0.31
MSH5-209ENST00000450148 OPRD1P41143 372 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 IFNAR2P48551 515 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 FNTBP49356 437 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 PGFP49763 221 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 SLC5A3P53794 718 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 PMS1P54277 932 aaKnown RBP13.11□□□□□ -0.31
MSH5-209ENST00000450148 IFRD2Q12894 506 aaPredicted RBP13.11□□□□□ -0.31
MSH5-209ENST00000450148 PPP2R5DQ14738 602 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 ZNF658Q5TYW1 1059 aaPredicted RBP13.11□□□□□ -0.31
MSH5-209ENST00000450148 CPA6Q8N4T0 437 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 SLC2A14Q8TDB8 520 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 OVCA2Q8WZ82 227 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 SEMA4DQ92854 862 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 ERCC4Q92889 916 aaPredicted RBP13.11□□□□□ -0.31
MSH5-209ENST00000450148 ATP2A3Q93084 1043 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 FBXO32Q969P5 355 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 EEF2KMTQ96G04 330 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 SLITRK1Q96PX8 696 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 GSDMAQ96QA5 445 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 P2RY13Q9BPV8 354 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 MED10Q9BTT4 135 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 TMEM8AQ9HCN3 771 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.11□□□□□ -0.311e-6■■■■■ 33.7
MSH5-209ENST00000450148 KRT82Q9NSB4 513 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 PCDHA5Q9Y5H7 936 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 SPTBN4Q9H254 2564 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 ATP8B3O60423 1300 aa13.11□□□□□ -0.31
MSH5-209ENST00000450148 HHLA1C9JL84 531 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 COCHO43405 550 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 CILPO75339 1184 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 KRT13P13646 458 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 GRSF1Q12849 480 aaKnown RBP eCLIP13.1□□□□□ -0.31
MSH5-209ENST00000450148 KRT39Q6A163 491 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 CLEC20AQ6ZU45 233 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 KIAA2013Q8IYS2 634 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 ADGRG2Q8IZP9 1017 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 TTC16Q8NEE8 873 aa13.1□□□□□ -0.31
MSH5-209ENST00000450148 PDZD8Q8NEN9 1154 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms