RNA–Protein interactions for RNA: ENST00000448926.5

LMBR1-212, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 3,629 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-212ENST00000448926 IRX4P78413 519 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 GBE1Q04446 702 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 KRT81Q14533 505 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 PKN2Q16513 984 aaKnown RBP4.38□□□□□ -1.71
LMBR1-212ENST00000448926 CCDC14Q49A88 953 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 PPP1R15BQ5SWA1 713 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 DARS2Q6PI48 645 aaKnown RBP4.38□□□□□ -1.71
LMBR1-212ENST00000448926 GPRIN1Q7Z2K8 1008 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 PNMA8AQ86V59 439 aaPredicted RBP4.38□□□□□ -1.71
LMBR1-212ENST00000448926 RASAL3Q86YV0 1011 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 TEX2Q8IWB9 1127 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 KATNAL2Q8IYT4 538 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 LINC01465Q8N7H1 131 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 C3orf20Q8ND61 904 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 ATL2Q8NHH9 583 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 CFAP36Q96G28 342 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 ELAC2Q9BQ52 826 aaKnown RBP4.38□□□□□ -1.71
LMBR1-212ENST00000448926 MED10Q9BTT4 135 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 NT5C1AQ9BXI3 368 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 BCO2Q9BYV7 579 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 UGT1A7Q9HAW7 530 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 UGT1A10Q9HAW8 530 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 UGT1A8Q9HAW9 530 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 NEU2Q9Y3R4 380 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 IPPQ9Y573 584 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 SCINQ9Y6U3 715 aa4.38□□□□□ -1.71
LMBR1-212ENST00000448926 TMEM120BA0PK00 339 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 VGLL3A8MV65 326 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 SCAMP3O14828 347 aaKnown RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 USP12O75317 370 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 RBP3P10745 1247 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 MCF2P10911 925 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 DARSP14868 501 aaKnown RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 AMPD1P23109 780 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 RBL1P28749 1068 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 CD52P31358 61 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 RPL22P35268 128 aaKnown RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 MAGEA4P43358 317 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 ERFP50548 548 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 CLCNKBP51801 687 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 MAP3K7CLP57077 242 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 EIF3EP60228 445 aaKnown RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 YWHAEP62258 255 aaKnown RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 RBP5P82980 135 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 ADIGQ0VDE8 80 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 MYO1EQ12965 1108 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 PPP2R5DQ14738 602 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 FSCN1Q16658 493 aaKnown RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 FAM110CQ1W6H9 321 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 NBPF20Q3BBV1 942 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 FAM133BQ5BKY9 247 aaKnown RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 MDH1BQ5I0G3 518 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 C9orf57Q5W0N0 161 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 FAM219BQ5XKK7 198 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 GDF6Q6KF10 455 aaPredicted RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 KCNV1Q6PIU1 500 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 CPLX4Q7Z7G2 160 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 FAM228AQ86W67 206 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 ZNF677Q86XU0 584 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 CCDC89Q8N998 374 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 RSAD2Q8WXG1 361 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 TRIB2Q92519 343 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 GCOM2Q9BZD3 368 aaPredicted RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 FGFR1OP2Q9NVK5 253 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 BARX2Q9UMQ3 279 aaPredicted RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 CNTN6Q9UQ52 1028 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 TTLL3Q9Y4R7 772 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 KIAA0100Q14667 2235 aaKnown RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 SHROOM3Q8TF72 1996 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 C2orf71A6NGG8 1288 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 HMGB1P1B2RPK0 211 aaPredicted RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 TCP11X1B4DZS4 312 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 STK25O00506 426 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 KCNN4O15554 427 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 PSTPIP1O43586 416 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 SHOX2O60902 331 aaPredicted RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 TRUB2O95900 331 aaKnown RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 MYBL1P10243 752 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 KLRC2P26717 231 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 GNL1P36915 607 aaPredicted RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 THPOP40225 353 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 FNTAP49354 379 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 PGFP49763 221 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 FLT3LGP49771 235 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 PRKCZQ05513 592 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 MAP2K5Q13163 448 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 BMPR2Q13873 1038 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 CYP1B1Q16678 543 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 DCAF6Q58WW2 860 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 TFDP3Q5H9I0 405 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 UBXN11Q5T124 520 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 SYPL2Q5VXT5 272 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 RHBDF2Q6PJF5 856 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 CYP4V2Q6ZWL3 525 aaPredicted RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 KDELC2Q7Z4H8 507 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 AGGF1Q8N302 714 aaeCLIP4.37□□□□□ -1.712e-17■■■■■ 34.4
LMBR1-212ENST00000448926 SMG8Q8ND04 991 aaKnown RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 EXD1Q8NHP7 514 aa4.37□□□□□ -1.71
LMBR1-212ENST00000448926 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.37□□□□□ -1.71
LMBR1-212ENST00000448926 TMEM174Q8WUU8 243 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms