RNA–Protein interactions for RNA: ENST00000448885.5

PCDH15-219, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-219ENST00000448885 RFX3P48380 749 aa6.39□□□□□ -1.39
PCDH15-219ENST00000448885 VSNL1P62760 191 aa6.39□□□□□ -1.39
PCDH15-219ENST00000448885 CHRNB3Q05901 458 aa6.39□□□□□ -1.39
PCDH15-219ENST00000448885 C1DQ13901 141 aaKnown RBP6.39□□□□□ -1.39
PCDH15-219ENST00000448885 NFYCQ13952 458 aa6.39□□□□□ -1.39
PCDH15-219ENST00000448885 PLCL1Q15111 1095 aa6.39□□□□□ -1.39
PCDH15-219ENST00000448885 FAM45BPQ6NSW5 357 aa6.39□□□□□ -1.39
PCDH15-219ENST00000448885 TLK2Q86UE8 772 aa6.39□□□□□ -1.39
PCDH15-219ENST00000448885 C3orf20Q8ND61 904 aa6.39□□□□□ -1.39
PCDH15-219ENST00000448885 CCDC3Q9BQI4 270 aa6.39□□□□□ -1.39
PCDH15-219ENST00000448885 PHF20Q9BVI0 1012 aa6.39□□□□□ -1.39
PCDH15-219ENST00000448885 HDHD2Q9H0R4 259 aa6.39□□□□□ -1.39
PCDH15-219ENST00000448885 WDCPQ9H6R7 721 aa6.39□□□□□ -1.39
PCDH15-219ENST00000448885 MYO5CQ9NQX4 1742 aa6.39□□□□□ -1.39
PCDH15-219ENST00000448885 ZNF839A8K0R7 811 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 HBP1O60381 514 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 FAM20BO75063 409 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 TSC22D2O75157 780 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 CNOT3O75175 753 aaKnown RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 C6orf222P0C671 652 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 CYP19A1P11511 503 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 CKBP12277 381 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 ITGALP20701 1170 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 GRK2P25098 689 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 CNTFP26441 200 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 CSNK2BP67870 215 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 MAD2L1Q13257 205 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 ITIH4Q14624 930 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 SF3B3Q15393 1217 aaKnown RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 XRRA1Q6P2D8 792 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 COL23A1Q86Y22 540 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 CD302Q8IX05 232 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 SLC44A5Q8NCS7 719 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 RDM1Q8NG50 284 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 ZNF669Q96BR6 464 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 REPS1Q96D71 796 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 TRIT1Q9H3H1 467 aaKnown RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 PIGUQ9H490 435 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 CHST12Q9NRB3 414 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 MRPL39Q9NYK5 338 aaKnown RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 UBQLN1Q9UMX0 589 aaKnown RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 ZNF142P52746 1687 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 TMEM120BA0PK00 339 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 MGAT4DA6NG13 374 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 NCF1BA6NI72 391 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 TTLL13PA6NNM8 815 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 NCF1CA8MVU1 366 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 FAM220BPB1ANY3 271 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 ANKRD65E5RJM6 399 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 NCF1P14598 390 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 GARTP22102 1010 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 ALDH7A1P49419 539 aaKnown RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 KPNA1P52294 538 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 HIRAP54198 1017 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 PDK2Q15119 407 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 FAM182BQ5T319 152 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 CYP4A22Q5TCH4 519 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 TMEM26Q6ZUK4 368 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 RNF180Q86T96 592 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 LRRC71Q8N4P6 559 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 SYN2Q92777 582 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 MAGEB18Q96M61 343 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 TEX13BQ9BXU2 312 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 ISCUQ9H1K1 167 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 CLEC4MQ9H2X3 399 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 PDGFCQ9NRA1 345 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 ERAP1Q9NZ08 941 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 LNPEPQ9UIQ6 1025 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 ERVK-7P63135 1459 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 KIAA1210Q9ULL0 1709 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 USP27XA6NNY8 438 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 CENPXA8MT69 81 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 RGS5O15539 181 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 TFRCP02786 760 aaKnown RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 MPOP05164 745 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 CAPN1P07384 714 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 GRK4P32298 578 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 RENBPP51606 427 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 MTA1Q13330 715 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 PRMT9Q6P2P2 845 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 SHC4Q6S5L8 630 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 BNC2Q6ZN30 1099 aaPredicted RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 PHACTR4Q8IZ21 702 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 RNASE11Q8TAA1 199 aaKnown RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 BLOC1S5Q8TDH9 187 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 LRRC39Q96DD0 335 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 CCT8L2Q96SF2 557 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 RNPEPQ9H4A4 650 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 COMMD8Q9NX08 183 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 FAM153AQ9UHL3 310 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 SAMD9LQ8IVG5 1584 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 A0A1B0GTH6 734 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 SYNCRIPO60506 623 aaKnown RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 GRAP2O75791 330 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 CLTBP09497 229 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 COMTP21964 271 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 SERPINB5P36952 375 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 TRMT2AQ8IZ69 625 aaKnown RBP6.38□□□□□ -1.39
PCDH15-219ENST00000448885 GPRC5AQ8NFJ5 357 aa6.38□□□□□ -1.39
PCDH15-219ENST00000448885 USP7Q93009 1102 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms