RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CLUHO75153 1309 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 MED7O43513 233 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 WDR4P57081 412 aaKnown RBP15.5■□□□□ 0.07
SF1-211ENST00000448404 PITX1P78337 314 aaPredicted RBP15.5■□□□□ 0.07
SF1-211ENST00000448404 SOX4Q06945 474 aaPredicted RBP15.5■□□□□ 0.07
SF1-211ENST00000448404 HAUS2Q9NVX0 235 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 STRIP2Q9ULQ0 834 aa15.5■□□□□ 0.07
SF1-211ENST00000448404 PIN4Q9Y237 131 aaKnown RBP15.5■□□□□ 0.07
SF1-211ENST00000448404 GLTPD2A6NH11 291 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 A6NNZ2 444 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 RNF8O76064 485 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 HMGCRP04035 888 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 KRT15P19012 456 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 CCNA1P78396 465 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 RBP5P82980 135 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 TUBB8Q3ZCM7 444 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 CCDC14Q49A88 953 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 MCRS1Q96EZ8 462 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 ZFP42Q96MM3 310 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 SERPINB12Q96P63 405 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 PGLYRP2Q96PD5 576 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 TMEM109Q9BVC6 243 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 NT5C1AQ9BXI3 368 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 CLDN5O00501 218 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 PAPSS1O43252 624 aaPredicted RBP15.49■□□□□ 0.07
SF1-211ENST00000448404 CELF2O95319 508 aaKnown RBP15.49■□□□□ 0.07
SF1-211ENST00000448404 SMIM10L2AP0DMW4 78 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 SMIM10L2BP0DMW5 78 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 CYP2B6P20813 491 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 TNFAIP2Q03169 654 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 SYDE1Q6ZW31 735 aaPredicted RBP15.49■□□□□ 0.07
SF1-211ENST00000448404 PYROXD2Q8N2H3 581 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 NIPA2Q8N8Q9 360 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 ARRDC4Q8NCT1 418 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 KHSRPQ92945 711 aaKnown RBP eCLIP15.49■□□□□ 0.071e-8■■■■□ 20.5
SF1-211ENST00000448404 CEP41Q9BYV8 373 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 TRIM6Q9C030 488 aaPredicted RBP15.49■□□□□ 0.07
SF1-211ENST00000448404 VTA1Q9NP79 307 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 HOMER3Q9NSC5 361 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 PNMA3Q9UL41 463 aa15.49■□□□□ 0.07
SF1-211ENST00000448404 C5orf60A6NFR6 353 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 C2CD4BA6NLJ0 364 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 MAGEB2O15479 319 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 CYP2C9P11712 490 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 HADHQ16836 314 aaKnown RBP15.48■□□□□ 0.07
SF1-211ENST00000448404 SOWAHAQ2M3V2 549 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 DUSP28Q4G0W2 176 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 LRRC38Q5VT99 294 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 DARS2Q6PI48 645 aaKnown RBP15.48■□□□□ 0.07
SF1-211ENST00000448404 TAOK1Q7L7X3 1001 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 AGGF1Q8N302 714 aaeCLIP15.48■□□□□ 0.07
SF1-211ENST00000448404 FAM172AQ8WUF8 416 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 L3MBTL3Q96JM7 780 aaPredicted RBP15.48■□□□□ 0.07
SF1-211ENST00000448404 ADAMTS10Q9H324 1103 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 ASB7Q9H672 318 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 CITO14578 2027 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 H7C0C1 242 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 FAM155BO75949 473 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 VDRP11473 427 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 GPD1P21695 349 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 ATP5OP48047 213 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 ANKRD20A8PQ5CZ79 823 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 CGB2Q6NT52 195 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 FBXO36Q8NEA4 188 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 MAML1Q92585 1016 aa15.48■□□□□ 0.07
SF1-211ENST00000448404 NKD2Q969F2 451 aaPredicted RBP15.48■□□□□ 0.07
SF1-211ENST00000448404 MAK16Q9BXY0 300 aaKnown RBP15.48■□□□□ 0.07
SF1-211ENST00000448404 TIMM13Q9Y5L4 95 aaPredicted RBP15.48■□□□□ 0.07
SF1-211ENST00000448404 A8MXQ7 604 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 CLGNO14967 610 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 GPR32O75388 356 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 IL4RP24394 825 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 STX2P32856 288 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 RPA3P35244 121 aaPredicted RBP15.47■□□□□ 0.07
SF1-211ENST00000448404 DNAJC3Q13217 504 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 DPYSL3Q14195 570 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 HIF1AQ16665 826 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 DGKDQ16760 1214 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 BBS12Q6ZW61 710 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 CCDC197Q8NCU1 140 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 SHCBP1Q8NEM2 672 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 TGS1Q96RS0 853 aaKnown RBP15.47■□□□□ 0.07
SF1-211ENST00000448404 ROPN1BQ9BZX4 212 aaPredicted RBP15.47■□□□□ 0.07
SF1-211ENST00000448404 ROPN1Q9HAT0 212 aaPredicted RBP15.47■□□□□ 0.07
SF1-211ENST00000448404 DONSONQ9NYP3 566 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 XPO7Q9UIA9 1087 aaKnown RBP15.47■□□□□ 0.07
SF1-211ENST00000448404 TRIM33Q9UPN9 1127 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 MYO18AQ92614 2054 aaKnown RBP15.47■□□□□ 0.07
SF1-211ENST00000448404 ITGAVP06756 1048 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 F7P08709 466 aaPredicted RBP15.47■□□□□ 0.07
SF1-211ENST00000448404 KRT7P08729 469 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 ZNF268Q14587 947 aaPredicted RBP15.47■□□□□ 0.07
SF1-211ENST00000448404 FAM187BQ17R55 369 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 C3orf62Q6ZUJ4 267 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 ZC3H15Q8WU90 426 aaKnown RBP15.47■□□□□ 0.07
SF1-211ENST00000448404 DDX56Q9NY93 547 aaKnown RBP15.47■□□□□ 0.07
SF1-211ENST00000448404 CDH16O75309 829 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 MYL3P08590 195 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 RBL1P28749 1068 aa15.47■□□□□ 0.07
SF1-211ENST00000448404 ZNF143P52747 638 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms