RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 EEF1DP3Q658K8 133 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 ZPBP2Q6X784 338 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 NCAPG2Q86XI2 1143 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 MAB21L3Q8N8X9 362 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 SERAC1Q96JX3 654 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 HEXIM2Q96MH2 286 aaKnown RBP13.48□□□□□ -0.25
SHC1-210ENST00000448116 ADPGKQ9BRR6 497 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 NIFKQ9BYG3 293 aaKnown RBP13.48□□□□□ -0.25
SHC1-210ENST00000448116 RAB6BQ9NRW1 208 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 GPATCH2LQ9NWQ4 482 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 USP18Q9UMW8 372 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 KIAA1217Q5T5P2 1943 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 NDC80O14777 642 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 PEX19P40855 299 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 ASPAP45381 313 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 CPA2P48052 419 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 EFNA5P52803 228 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 SLC18A1P54219 525 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 ZNF200P98182 395 aaPredicted RBP13.48□□□□□ -0.25
SHC1-210ENST00000448116 CATSPERGQ6ZRH7 1159 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 BANPQ8N9N5 519 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 MCUR1Q96AQ8 359 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 SLC13A1Q9BZW2 595 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.48□□□□□ -0.25
SHC1-210ENST00000448116 HOXC10Q9NYD6 342 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 HMGXB4Q9UGU5 601 aa13.48□□□□□ -0.25
SHC1-210ENST00000448116 IQANK1A0A1B0GTG1 560 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 TCRBV9S1A1TA0A576 114 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 SPDYE16A6NNV3 312 aaPredicted RBP13.47□□□□□ -0.25
SHC1-210ENST00000448116 GYG2O15488 501 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 ROR1Q01973 937 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 OR6B2Q6IFH4 312 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 POLNQ7Z5Q5 900 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 CCDC33Q8N5R6 958 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 TWNKQ96RR1 684 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 TMEM120AQ9BXJ8 343 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 SMYD3Q9H7B4 428 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 PPCSQ9HAB8 311 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 BATF3Q9NR55 127 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 ARMCX1Q9P291 453 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 KANSL3Q9P2N6 904 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 CCDC195A0A1B0GUA6 201 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 NOP56O00567 594 aaKnown RBP13.47□□□□□ -0.25
SHC1-210ENST00000448116 MED7O43513 233 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 TPBGLP0DKB5 382 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 OAZ1P54368 228 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 CCDC142Q17RM4 750 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 C15orf59Q2T9L4 293 aaPredicted RBP13.47□□□□□ -0.25
SHC1-210ENST00000448116 MDH1BQ5I0G3 518 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 NIPA2Q8N8Q9 360 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 DTX3LQ8TDB6 740 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 XYLT2Q9H1B5 865 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 CPSF3Q9UKF6 684 aaKnown RBP13.47□□□□□ -0.25
SHC1-210ENST00000448116 PCDHGC3Q9UN70 934 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.47□□□□□ -0.25
SHC1-210ENST00000448116 FARP2O94887 1054 aaPredicted RBP13.47□□□□□ -0.25
SHC1-210ENST00000448116 ATG7O95352 703 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 HOXC6P09630 235 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 KITP10721 976 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 IGBP1P78318 339 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 ANGEL2Q5VTE6 544 aaKnown RBP13.47□□□□□ -0.25
SHC1-210ENST00000448116 DSTYKQ6XUX3 929 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 ANKRD23Q86SG2 305 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 XYLT1Q86Y38 959 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 SEPT1Q8WYJ6 367 aa13.47□□□□□ -0.25
SHC1-210ENST00000448116 ASCC2Q9H1I8 757 aaPredicted RBP13.47□□□□□ -0.25
SHC1-210ENST00000448116 TRIM49D1C9J1S8 452 aa13.46□□□□□ -0.25
SHC1-210ENST00000448116 APOC4-APOC2K7ER74 178 aa13.46□□□□□ -0.25
SHC1-210ENST00000448116 MAFO75444 373 aaPredicted RBP13.46□□□□□ -0.25
SHC1-210ENST00000448116 WFS1O76024 890 aa13.46□□□□□ -0.25
SHC1-210ENST00000448116 APOC2P02655 101 aa13.46□□□□□ -0.25
SHC1-210ENST00000448116 ITGB3P05106 788 aa13.46□□□□□ -0.25
SHC1-210ENST00000448116 ESRRAP11474 423 aaPredicted RBP13.46□□□□□ -0.25
SHC1-210ENST00000448116 PTPN7P35236 360 aa13.46□□□□□ -0.25
SHC1-210ENST00000448116 RGS7P49802 495 aa13.46□□□□□ -0.25
SHC1-210ENST00000448116 KRT81Q14533 505 aa13.46□□□□□ -0.25
SHC1-210ENST00000448116 ATF7IP2Q5U623 682 aa13.46□□□□□ -0.25
SHC1-210ENST00000448116 TTC7BQ86TV6 843 aa13.46□□□□□ -0.25
SHC1-210ENST00000448116 PRPF39Q86UA1 669 aaKnown RBP13.46□□□□□ -0.25
SHC1-210ENST00000448116 MIPEPQ99797 713 aa13.46□□□□□ -0.25
SHC1-210ENST00000448116 MECRQ9BV79 373 aa13.46□□□□□ -0.25
SHC1-210ENST00000448116 RPF1Q9H9Y2 349 aaKnown RBP13.46□□□□□ -0.25
SHC1-210ENST00000448116 COPEO14579 308 aa13.46□□□□□ -0.26
SHC1-210ENST00000448116 TM9SF1O15321 606 aa13.46□□□□□ -0.26
SHC1-210ENST00000448116 KCNN4O15554 427 aa13.46□□□□□ -0.26
SHC1-210ENST00000448116 PDGFRAP16234 1089 aa13.46□□□□□ -0.26
SHC1-210ENST00000448116 GCKP35557 465 aa13.46□□□□□ -0.26
SHC1-210ENST00000448116 IRX4P78413 519 aa13.46□□□□□ -0.26
SHC1-210ENST00000448116 TARBP2Q15633 366 aaKnown RBP13.46□□□□□ -0.26
SHC1-210ENST00000448116 KHDC1Q4VXA5 237 aaKnown RBP13.46□□□□□ -0.26
SHC1-210ENST00000448116 CAPRIN2Q6IMN6 1127 aaKnown RBP13.46□□□□□ -0.26
SHC1-210ENST00000448116 ALKBH8Q96BT7 664 aaKnown RBP13.46□□□□□ -0.26
SHC1-210ENST00000448116 CADM1Q9BY67 442 aaKnown RBP13.46□□□□□ -0.26
SHC1-210ENST00000448116 VPS11Q9H270 941 aa13.46□□□□□ -0.26
SHC1-210ENST00000448116 NGRNQ9NPE2 291 aaKnown RBP13.46□□□□□ -0.26
SHC1-210ENST00000448116 CYLDQ9NQC7 956 aa13.46□□□□□ -0.26
SHC1-210ENST00000448116 MARCOQ9UEW3 520 aaPredicted RBP13.46□□□□□ -0.26
SHC1-210ENST00000448116 FAM237BA0A1B0GVD1 139 aa13.45□□□□□ -0.26
SHC1-210ENST00000448116 FAM189A1O60320 539 aa13.45□□□□□ -0.26
SHC1-210ENST00000448116 NFICP08651 508 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms