RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 AGKQ53H12 422 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 DENND5BQ6ZUT9 1274 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 TRPC4APQ8TEL6 797 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 DLG3Q92796 817 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 NGRNQ9NPE2 291 aaKnown RBP8.16□□□□□ -1.1
SMG1-202ENST00000446231 RAD51BO15315 384 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 ARHGDIAP52565 204 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 DEPDC1Q5TB30 811 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 CEP95Q96GE4 821 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 CHKBQ9Y259 395 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 MYH7BA7E2Y1 1941 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 NOTOA8MTQ0 251 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 CYTH3O43739 400 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 C6orf222P0C671 652 aaPredicted RBP8.16□□□□□ -1.1
SMG1-202ENST00000446231 TROAPQ12815 778 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 SURF1Q15526 300 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 ZNF699Q32M78 642 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 CAPN8A6NHC0 703 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 PFDN6O15212 129 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 ADAMTS2O95450 1211 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 GH1P01241 217 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 ABCB5Q2M3G0 1257 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 FAM228AQ86W67 206 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 NCAPG2Q86XI2 1143 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 REXO4Q9GZR2 422 aaKnown RBP8.16□□□□□ -1.1
SMG1-202ENST00000446231 GANQ9H2C0 597 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 TDRKHQ9Y2W6 561 aaKnown RBP8.16□□□□□ -1.1
SMG1-202ENST00000446231 FOXO6A8MYZ6 492 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 ANO4Q32M45 955 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 SAMD4BQ5PRF9 694 aaKnown RBP8.15□□□□□ -1.1
SMG1-202ENST00000446231 TAMM41Q96BW9 452 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 PROSCO94903 275 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 RARBP10826 455 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 FOXD4Q12950 439 aaPredicted RBP8.15□□□□□ -1.1
SMG1-202ENST00000446231 PI4KBQ9UBF8 816 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 VWA5AO00534 786 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 TPST1O60507 370 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 NME5P56597 212 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 PSME3P61289 254 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 KLHL8Q9P2G9 620 aaPredicted RBP8.15□□□□□ -1.1
SMG1-202ENST00000446231 TMED5Q9Y3A6 229 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 AP4B1Q9Y6B7 739 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 TMEM247A6NEH6 219 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 SERPINB2P05120 415 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 AMPD1P23109 780 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 SLC15A2Q16348 729 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 SNRNP35Q16560 246 aaKnown RBP8.15□□□□□ -1.1
SMG1-202ENST00000446231 APTXQ7Z2E3 356 aaKnown RBP8.15□□□□□ -1.1
SMG1-202ENST00000446231 CCDC24Q8N4L8 307 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 ARHGEF26Q96DR7 871 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 OTUD5Q96G74 571 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 WDR12Q9GZL7 423 aaKnown RBP8.15□□□□□ -1.1
SMG1-202ENST00000446231 PCDHA3Q9Y5H8 950 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 STX7O15400 261 aaKnown RBP8.15□□□□□ -1.1
SMG1-202ENST00000446231 MYBPC2Q14324 1141 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 ZBTB33Q86T24 672 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 DNAJC1Q96KC8 554 aaKnown RBP8.15□□□□□ -1.1
SMG1-202ENST00000446231 DENND3A2RUS2 1198 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 TRIM24O15164 1050 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 ACTR2P61160 394 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 KBTBD2Q8IY47 623 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 C9orf16Q9BUW7 83 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 ZC3H12CQ9C0D7 883 aaKnown RBP8.15□□□□□ -1.1
SMG1-202ENST00000446231 PCDH9Q9HC56 1237 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 MLH3Q9UHC1 1453 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 CYP11B2P19099 503 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 MAPK10P53779 464 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 ERI1Q8IV48 349 aaKnown RBP8.15□□□□□ -1.1
SMG1-202ENST00000446231 CLPTM1LQ96KA5 538 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 CHID1Q9BWS9 393 aa8.15□□□□□ -1.1
SMG1-202ENST00000446231 KCNQ4P56696 695 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 LSAMPQ13449 338 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 ADGRF4Q8IZF3 695 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 DHX38Q92620 1227 aaKnown RBP8.15□□□□□ -1.11
SMG1-202ENST00000446231 CCDC17Q96LX7 622 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 RPRD1BQ9NQG5 326 aaKnown RBP8.15□□□□□ -1.11
SMG1-202ENST00000446231 HEATR9A2RTY3 570 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 GNPATO15228 680 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 APOA4P06727 396 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 NFKBIAP25963 317 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 PRKAA1Q13131 559 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 TMEM119Q4V9L6 283 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 ACSBG2Q5FVE4 666 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 AADACL2Q6P093 401 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 CPXCR1Q8N123 301 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 RIN3Q8TB24 985 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 NEUROG2Q9H2A3 272 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 SPEF1Q9Y4P9 236 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 LDHAP00338 332 aaKnown RBP8.15□□□□□ -1.11
SMG1-202ENST00000446231 CDH2P19022 906 aaPredicted RBP8.15□□□□□ -1.11
SMG1-202ENST00000446231 TTC30AQ86WT1 665 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 PTGIRP43119 386 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 MARCKSL1P49006 195 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 TCP10Q12799 353 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 TMTC4Q5T4D3 741 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 FAM172AQ8WUF8 416 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 SLC10A4Q96EP9 437 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 CEP170P1Q96L14 293 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 BTBD9Q96Q07 612 aa8.15□□□□□ -1.11
SMG1-202ENST00000446231 ITGA11Q9UKX5 1188 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms