RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 GPRIN1Q7Z2K8 1008 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 PHLDB2Q86SQ0 1253 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 PHF13Q86YI8 300 aaPredicted RBP18.34■□□□□ 0.53
SGCE-206ENST00000445866 SIX6OS1Q8N1H7 587 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 MICALL1Q8N3F8 863 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 DEFB123Q8N688 67 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 EIF3CQ99613 913 aaKnown RBP18.34■□□□□ 0.53
SGCE-206ENST00000445866 MIS12Q9H081 205 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 MAGED2Q9UNF1 606 aaPredicted RBP18.34■□□□□ 0.53
SGCE-206ENST00000445866 SLC38A8A6NNN8 435 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 E5RJQ4 531 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 ZNF263O14978 683 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 RFPL2O75678 378 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 SLC5A3P53794 718 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 IFRD2Q12894 506 aaPredicted RBP18.34■□□□□ 0.53
SGCE-206ENST00000445866 MTMR3Q13615 1198 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 PTPN20Q4JDL3 420 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 DNAJB7Q7Z6W7 309 aaPredicted RBP18.34■□□□□ 0.53
SGCE-206ENST00000445866 MCOLN2Q8IZK6 566 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 ELMOD1Q8N336 334 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 EFHBQ8N7U6 833 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 STKLD1Q8NE28 680 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 VN1R2Q8NFZ6 395 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 IPO4Q8TEX9 1081 aaKnown RBP18.34■□□□□ 0.53
SGCE-206ENST00000445866 CEP295NLQ96MC4 621 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 ZNF512Q96ME7 567 aaPredicted RBP18.34■□□□□ 0.53
SGCE-206ENST00000445866 CDX2Q99626 313 aaPredicted RBP18.34■□□□□ 0.53
SGCE-206ENST00000445866 C11orf70Q9BRQ4 267 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 KCNF1Q9H3M0 494 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 CYLDQ9NQC7 956 aa18.34■□□□□ 0.53
SGCE-206ENST00000445866 CCL16O15467 120 aa18.33■□□□□ 0.52
SGCE-206ENST00000445866 RTN3O95197 1032 aaPredicted RBP18.33■□□□□ 0.52
SGCE-206ENST00000445866 ERBB2P04626 1255 aa18.33■□□□□ 0.52
SGCE-206ENST00000445866 CSH1P0DML2 217 aa18.33■□□□□ 0.52
SGCE-206ENST00000445866 CSH2P0DML3 217 aa18.33■□□□□ 0.52
SGCE-206ENST00000445866 RPL34P49207 117 aaKnown RBP18.33■□□□□ 0.52
SGCE-206ENST00000445866 C1QBPQ07021 282 aaKnown RBP18.33■□□□□ 0.52
SGCE-206ENST00000445866 ADIGQ0VDE8 80 aa18.33■□□□□ 0.52
SGCE-206ENST00000445866 RAB41Q5JT25 222 aa18.33■□□□□ 0.52
SGCE-206ENST00000445866 C10orf76Q5T2E6 689 aa18.33■□□□□ 0.52
SGCE-206ENST00000445866 CYP4A22Q5TCH4 519 aa18.33■□□□□ 0.52
SGCE-206ENST00000445866 OR6B2Q6IFH4 312 aa18.33■□□□□ 0.52
SGCE-206ENST00000445866 C12orf76Q8N812 135 aaPredicted RBP18.33■□□□□ 0.52
SGCE-206ENST00000445866 MYLIPQ8WY64 445 aa18.33■□□□□ 0.52
SGCE-206ENST00000445866 CASP10Q92851 521 aa18.33■□□□□ 0.52
SGCE-206ENST00000445866 VCPIP1Q96JH7 1222 aa18.33■□□□□ 0.52
SGCE-206ENST00000445866 TJP2Q9UDY2 1190 aa18.33■□□□□ 0.52
SGCE-206ENST00000445866 ASB3Q9Y575 518 aa18.33■□□□□ 0.52
SGCE-206ENST00000445866 PCDHA13Q9Y5I0 950 aa18.33■□□□□ 0.52
SGCE-206ENST00000445866 CCDC195A0A1B0GUA6 201 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 LINC01565O15544 149 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 LCA5LO95447 670 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 ZBED1O96006 694 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 CALB1P05937 261 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 H2AFZP0C0S5 128 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 USP17L7P0C7H9 530 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 ABCB4P21439 1286 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 YWHAQP27348 245 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 GABRB2P47870 512 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 GALCP54803 685 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 KRT83P78385 493 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 ADAM15Q13444 863 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 KCNC3Q14003 757 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 EP400NLQ6ZTU2 488 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 TOGARAM2Q6ZUX3 1019 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 H2AFVQ71UI9 128 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 ITIH5Q86UX2 942 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 ULBP1Q9BZM6 244 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 FBXO44Q9H4M3 255 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 LUC7LQ9NQ29 371 aaKnown RBP18.32■□□□□ 0.52
SGCE-206ENST00000445866 CHORDC1Q9UHD1 332 aaPredicted RBP18.32■□□□□ 0.52
SGCE-206ENST00000445866 NENFQ9UMX5 172 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 CDH23Q9H251 3354 aa18.32■□□□□ 0.52
SGCE-206ENST00000445866 NCK2O43639 380 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 HNRNPA1P09651 372 aaKnown RBP eCLIP18.31■□□□□ 0.52
SGCE-206ENST00000445866 SRGAP2BP0DMP2 458 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 USP46P62068 366 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 PTP4A2Q12974 167 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 ZNF268Q14587 947 aaPredicted RBP18.31■□□□□ 0.52
SGCE-206ENST00000445866 TMEM184AQ6ZMB5 413 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 MON1BQ7L1V2 547 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 ACRBPQ8NEB7 543 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 NDRG1Q92597 394 aaKnown RBP18.31■□□□□ 0.52
SGCE-206ENST00000445866 DESI2Q9BSY9 194 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 COMMD8Q9NX08 183 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 ZDHHC7Q9NXF8 308 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 EHD2Q9NZN4 543 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 USP3Q9Y6I4 520 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 ANKRD62A6NC57 917 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 PAPSS1O43252 624 aaPredicted RBP18.31■□□□□ 0.52
SGCE-206ENST00000445866 XYLBO75191 536 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 FBXO21O94952 628 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 GPC5P78333 572 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 XYLT1Q86Y38 959 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 PSMG2Q969U7 264 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 PACSIN1Q9BY11 444 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 PRKD2Q9BZL6 878 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 CNGB3Q9NQW8 809 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 DZANK1Q9NVP4 752 aa18.31■□□□□ 0.52
SGCE-206ENST00000445866 IL37Q9NZH6 218 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms