RNA–Protein interactions for RNA: ENST00000445752.5

CCDC144B-202, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2 BASIC

Gene CCDC144B, Length 2,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-202ENST00000445752 CCDC38Q502W7 563 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 XKR4Q5GH76 650 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 CYP4V2Q6ZWL3 525 aaPredicted RBP16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 TMEM110Q86TL2 294 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 APPL2Q8NEU8 664 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 MAK16Q9BXY0 300 aaKnown RBP16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 FAM107BQ9H098 131 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 STMN4Q9H169 189 aaPredicted RBP16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 PAPSS1O43252 624 aaPredicted RBP16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 DUSP11O75319 330 aaKnown RBP16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 GABBR2O75899 941 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 PECAM1P16284 738 aaPredicted RBP16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 HOXC8P31273 242 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 PNPLA4P41247 253 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 ARHGAP17Q68EM7 881 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 CYP4F22Q6NT55 531 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 CXCL17Q6UXB2 119 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 NLRP14Q86W24 1093 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 FAM172AQ8WUF8 416 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 RSAD2Q8WXG1 361 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 RSAD1Q9HA92 442 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 SAYSD1Q9NPB0 183 aa16.72■□□□□ 0.27
CCDC144B-202ENST00000445752 APOC4-APOC2K7ER74 178 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 M0QZ92 97 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 PGK1P00558 417 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 APOC2P02655 101 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 SDC4P31431 198 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 MAGEA4P43358 317 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 SV2CQ496J9 727 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 MFSD5Q6N075 450 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 TAF2Q6P1X5 1199 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 CLEC4CQ8WTT0 213 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 ZFP42Q96MM3 310 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 FRMD8P1Q9BZ68 369 aaPredicted RBP16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 GDAP2Q9NXN4 497 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 EBAG9O00559 213 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 HUS1O60921 280 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 LCP1P13796 627 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 MMP13P45452 471 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 SNX16P57768 344 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 EIF3EP60228 445 aaKnown RBP16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 MRPS6P82932 125 aaKnown RBP16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 BST2Q10589 180 aaKnown RBP16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 KRT81Q14533 505 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 MORF4L2Q15014 288 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 HP1BP3Q5SSJ5 553 aaPredicted RBP16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 RNASEH2BQ5TBB1 312 aaKnown RBP16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 ADGRF2Q8IZF7 708 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 MYCBPAPQ8TBZ2 947 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 KHSRPQ92945 711 aaKnown RBP eCLIP16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 CCT8L2Q96SF2 557 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 FOXP3Q9BZS1 431 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 ARHGAP39Q9C0H5 1083 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 GPATCH2LQ9NWQ4 482 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 CTNNAL1Q9UBT7 734 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 CDY2AQ9Y6F7 541 aa16.71■□□□□ 0.27
CCDC144B-202ENST00000445752 DPYSL4O14531 572 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 MCF2LO15068 1137 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 CTSHP09668 335 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 CHN1P15882 459 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 BCAT1P54687 386 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 LILRA4P59901 499 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 DPYSL3Q14195 570 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 NBPF20Q3BBV1 942 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 FAM47CQ5HY64 1035 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 NPNTQ6UXI9 565 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 CEP128Q6ZU80 1094 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 B4GALNT4Q76KP1 1039 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 RELL1Q8IUW5 271 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 CRYBG2Q8N1P7 616 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 TAB3Q8N5C8 712 aaPredicted RBP16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 ANKRD52Q8NB46 1076 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 SPATA18Q8TC71 538 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 SLC2A14Q8TDB8 520 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 ZNF473Q8WTR7 871 aaKnown RBP16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 STK32AQ8WU08 396 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 SERPINB12Q96P63 405 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 MTG1Q9BT17 334 aaPredicted RBP16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 GMNCA6NCL1 334 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 GOLGA8MH3BSY2 632 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 TRAPPC3O43617 180 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 DESP17661 470 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 SREBF2Q12772 1141 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 ZC3H12AQ5D1E8 599 aaKnown RBP16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 TNFAIP8L3Q5GJ75 292 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 ZDHHC17Q8IUH5 632 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 UNC45BQ8IWX7 931 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 TSPAN18Q96SJ8 248 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 GTF2IRD1Q9UHL9 959 aa16.7■□□□□ 0.26
CCDC144B-202ENST00000445752 DCAF8L1A6NGE4 600 aa16.69■□□□□ 0.26
CCDC144B-202ENST00000445752 MEIS3P2A8K0S8 358 aa16.69■□□□□ 0.26
CCDC144B-202ENST00000445752 FAM155AB1AL88 458 aaPredicted RBP16.69■□□□□ 0.26
CCDC144B-202ENST00000445752 PTGESO14684 152 aa16.69■□□□□ 0.26
CCDC144B-202ENST00000445752 MYCNP04198 464 aaPredicted RBP16.69■□□□□ 0.26
CCDC144B-202ENST00000445752 RBP3P10745 1247 aa16.69■□□□□ 0.26
CCDC144B-202ENST00000445752 CTCFP49711 727 aaPredicted RBP16.69■□□□□ 0.26
CCDC144B-202ENST00000445752 FASTKD3Q14CZ7 662 aaKnown RBP16.69■□□□□ 0.26
CCDC144B-202ENST00000445752 GDF6Q6KF10 455 aaPredicted RBP16.69■□□□□ 0.26
CCDC144B-202ENST00000445752 TAOK1Q7L7X3 1001 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms