RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 RHBDL3P58872 404 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 NFIL3Q16649 462 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 MARK4Q96L34 752 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 KATNAL1Q9BW62 490 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 CINPQ9BW66 212 aaPredicted RBP8.3□□□□□ -1.08
RIF1-205ENST00000444746 SLC7A5P2Q9GIP4 190 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 TSPAN16Q9UKR8 245 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 ABCA9Q8IUA7 1624 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 MAGEB2O15479 319 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 SUPT7LO94864 414 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 TRIM16O95361 564 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 GUCA1CO95843 209 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 CPT1AP50416 773 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 PLOD1Q02809 727 aaPredicted RBP8.3□□□□□ -1.08
RIF1-205ENST00000444746 GMCL1P1Q8NEA9 526 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 FBXO32Q969P5 355 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 LENG1Q96BZ8 264 aaPredicted RBP8.3□□□□□ -1.08
RIF1-205ENST00000444746 MTFMTQ96DP5 389 aaKnown RBP8.3□□□□□ -1.08
RIF1-205ENST00000444746 WWP1Q9H0M0 922 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 PAK5Q9P286 719 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 ANGPT2O15123 496 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 RARAP10276 462 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 TGM2P21980 687 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 MAPK7Q13164 816 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 POU6F1Q14863 301 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 TRPM8Q7Z2W7 1104 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 COLGALT1Q8NBJ5 622 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 MAGEB10Q96LZ2 347 aaPredicted RBP8.3□□□□□ -1.08
RIF1-205ENST00000444746 CNBD2Q96M20 576 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 IGFLR1Q9H665 355 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 RSAD1Q9HA92 442 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 A1CFQ9NQ94 594 aaKnown RBP8.3□□□□□ -1.08
RIF1-205ENST00000444746 ADARB2Q9NS39 739 aaKnown RBP8.3□□□□□ -1.08
RIF1-205ENST00000444746 UBQLN1Q9UMX0 589 aaKnown RBP8.3□□□□□ -1.08
RIF1-205ENST00000444746 DNAJC16Q9Y2G8 782 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 GAKO14976 1311 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 H3BRB1 525 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 KCNK1O00180 336 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 KATNA1O75449 491 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 FKBP9O95302 570 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 SNRPAP09012 282 aaKnown RBP8.3□□□□□ -1.08
RIF1-205ENST00000444746 SLC12A3P55017 1021 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 FCGRTP55899 365 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 ADIGQ0VDE8 80 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 FKBP9P1Q75LS8 142 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 SPATA6LQ8N4H0 392 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 NDRG1Q92597 394 aaKnown RBP8.3□□□□□ -1.08
RIF1-205ENST00000444746 NR1H4Q96RI1 486 aaPredicted RBP8.3□□□□□ -1.08
RIF1-205ENST00000444746 DNAJC5Q9H3Z4 198 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 TUT1Q9H6E5 874 aaKnown RBP8.3□□□□□ -1.08
RIF1-205ENST00000444746 TRIM33Q9UPN9 1127 aa8.3□□□□□ -1.08
RIF1-205ENST00000444746 VIL1P09327 827 aaKnown RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 MARCKSL1P49006 195 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 TDRD10Q5VZ19 366 aaKnown RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 CENPPQ6IPU0 288 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 MFSD7Q6UXD7 560 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 LRIG3Q6UXM1 1119 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 PHF21BQ96EK2 531 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 ZFYVE19Q96K21 471 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 TMEM237Q96Q45 408 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 TRIM15Q9C019 465 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 USP18Q9UMW8 372 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 MST1RQ04912 1400 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 KDM4FA0A1W2PPD8 638 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 NAMPTP43490 491 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 NUDT2P50583 147 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 RSPH1Q8WYR4 309 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 PAFAH2Q99487 392 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 TIPINQ9BVW5 301 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 RANBP17Q9H2T7 1088 aaKnown RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 GTF3C4Q9UKN8 822 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 COL3A1P02461 1466 aaPredicted RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 SRP72O76094 671 aaKnown RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 POLBP06746 335 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 CYP2F1P24903 491 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 GTF2A2P52657 109 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 CDH18Q13634 790 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 PKN2Q16513 984 aaKnown RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 TMEM154Q6P9G4 183 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 MFN1Q8IWA4 741 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 DCP1BQ8IZD4 617 aaKnown RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 VPS50Q96JG6 964 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 DACH2Q96NX9 599 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 TMBIM4Q9HC24 238 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 INTS13Q9NVM9 706 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 MYBL2P10244 700 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 GARTP22102 1010 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 ERVK-9P63128 1117 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 TRIP10Q15642 601 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 EFHC1Q5JVL4 640 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 DENND1BQ6P3S1 775 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 LNX1Q8TBB1 728 aaPredicted RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 GMCL1Q96IK5 515 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 O00370 1275 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 PDE2AO00408 941 aaPredicted RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 TRAPPC3O43617 180 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 SHBGP04278 402 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 MGAT1P26572 445 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 ALDH1A3P47895 512 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms