RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 CHADO15335 359 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 RTN3O95197 1032 aaPredicted RBP14.32□□□□□ -0.12
GARNL3-208ENST00000444677 GLULP15104 373 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 HDCP19113 662 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 SLC9A1P19634 815 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 RFX1P22670 979 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 ERCC5P28715 1186 aaPredicted RBP14.32□□□□□ -0.12
GARNL3-208ENST00000444677 MTIF2P46199 727 aaKnown RBP14.32□□□□□ -0.12
GARNL3-208ENST00000444677 CLCN5P51795 746 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 NHLH1Q02575 133 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 TRIM68Q6AZZ1 485 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 PHLDB3Q6NSJ2 640 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 PPM1KQ8N3J5 372 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 DNASE1L2Q92874 299 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 IRF7Q92985 503 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 KREMEN1Q96MU8 473 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 ZSWIM1Q9BR11 485 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 DDX23Q9BUQ8 820 aaKnown RBP14.32□□□□□ -0.12
GARNL3-208ENST00000444677 KCNH6Q9H252 994 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 GTSE1Q9NYZ3 720 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 PCDHB4Q9Y5E5 795 aa14.32□□□□□ -0.12
GARNL3-208ENST00000444677 ZDBF2Q9HCK1 2354 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 KANSL1LA0AUZ9 987 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 TULP2O00295 520 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 CKMP06732 381 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 USP17L7P0C7H9 530 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 ARSAP15289 507 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 CD19P15391 556 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 TARSP26639 723 aaKnown RBP14.31□□□□□ -0.12
GARNL3-208ENST00000444677 HOXD11P31277 338 aaPredicted RBP14.31□□□□□ -0.12
GARNL3-208ENST00000444677 PRKCQQ04759 706 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 UBXN2BQ14CS0 331 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 ARHGAP17Q68EM7 881 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 TMEM270Q6UE05 265 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 C11orf57Q6ZUT1 292 aaPredicted RBP14.31□□□□□ -0.12
GARNL3-208ENST00000444677 TTC30AQ86WT1 665 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 SH3RF2Q8TEC5 729 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 TFAP2BQ92481 460 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 DUSP16Q9BY84 665 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 THAP9Q9H5L6 903 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 HPS4Q9NQG7 708 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 SMPD4Q9NXE4 827 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 TMEM63CQ9P1W3 806 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 PIAS3Q9Y6X2 628 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 MIA3Q5JRA6 1907 aa14.31□□□□□ -0.12
GARNL3-208ENST00000444677 FAM92AA1XBS5 289 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 OTOL1A6NHN0 477 aaPredicted RBP14.3□□□□□ -0.12
GARNL3-208ENST00000444677 FAM170BA6NMN3 283 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 SOBPA7XYQ1 873 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 SCAMP3O14828 347 aaKnown RBP14.3□□□□□ -0.12
GARNL3-208ENST00000444677 OAS1P00973 400 aaKnown RBP14.3□□□□□ -0.12
GARNL3-208ENST00000444677 ZDHHC11BP0C7U3 371 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 TBXAS1P24557 533 aaPredicted RBP14.3□□□□□ -0.12
GARNL3-208ENST00000444677 CETN1Q12798 172 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 TCF15Q12870 199 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 ZNF268Q14587 947 aaPredicted RBP14.3□□□□□ -0.12
GARNL3-208ENST00000444677 ZNF77Q15935 545 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 GOLGA7BQ2TAP0 167 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 ARHGAP29Q52LW3 1261 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 TTC39CQ8N584 583 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 UBA3Q8TBC4 463 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 WBP2Q969T9 261 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 SHDQ96IW2 340 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 SLITRK1Q96PX8 696 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 FAM83CQ9BQN1 747 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 LINC00597Q9H2U6 94 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 CCSER2Q9H7U1 834 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 LTB4R2Q9NPC1 389 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 UBE2TQ9NPD8 197 aaPredicted RBP14.3□□□□□ -0.12
GARNL3-208ENST00000444677 TRPV5Q9NQA5 729 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 OSER1Q9NX31 292 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 EHD2Q9NZN4 543 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 DLGAP2Q9P1A6 1054 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 DACH1Q9UI36 760 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 ZMYM5Q9UJ78 669 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 NDRG2Q9UN36 371 aaKnown RBP14.3□□□□□ -0.12
GARNL3-208ENST00000444677 SIT1Q9Y3P8 196 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 CPQQ9Y646 472 aa14.3□□□□□ -0.12
GARNL3-208ENST00000444677 LEFTY2O00292 366 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 CYP26A1O43174 497 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 COCHO43405 550 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 TBX18O95935 607 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 MBD3O95983 291 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 VDRP11473 427 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 TRIM21P19474 475 aaKnown RBP14.29□□□□□ -0.12
GARNL3-208ENST00000444677 BRD2P25440 801 aaKnown RBP14.29□□□□□ -0.12
GARNL3-208ENST00000444677 KPNA1P52294 538 aaPredicted RBP14.29□□□□□ -0.12
GARNL3-208ENST00000444677 KIF11P52732 1056 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 YWHAEP62258 255 aaKnown RBP14.29□□□□□ -0.12
GARNL3-208ENST00000444677 PDE4CQ08493 712 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 USP4Q13107 963 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 FZD5Q13467 585 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 MTF1Q14872 753 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 SGO2Q562F6 1265 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 MIIPQ5JXC2 388 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 CCDC183Q5T5S1 534 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 TXNDC11Q6PKC3 985 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 ALYREFQ86V81 257 aaKnown RBP14.29□□□□□ -0.12
GARNL3-208ENST00000444677 PIGZQ86VD9 579 aa14.29□□□□□ -0.12
GARNL3-208ENST00000444677 CCDC105Q8IYK2 499 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms