RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 DNAJC12Q9UKB3 198 aa11.45□□□□□ -0.58
HDAC6-211ENST00000443563 TSPAN16Q9UKR8 245 aa11.45□□□□□ -0.58
HDAC6-211ENST00000443563 DUSP12Q9UNI6 340 aa11.45□□□□□ -0.58
HDAC6-211ENST00000443563 CUL9Q8IWT3 2517 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 TRAV19A0A0A6YYK7 116 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 FAM92AA1XBS5 289 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 RNF225M0QZC1 329 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-211ENST00000443563 O00370 1275 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 XPO1O14980 1071 aaKnown RBP11.44□□□□□ -0.58
HDAC6-211ENST00000443563 BEST1O76090 585 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 USP17L7P0C7H9 530 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 SRFP11831 508 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 GNA15P30679 374 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 USP8P40818 1118 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 BPIFB4P59827 614 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 USP46P62068 366 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 UBXN1Q04323 297 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 PTK2Q05397 1052 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 KCNMA1Q12791 1236 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 IFRD2Q12894 506 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-211ENST00000443563 TAF10Q12962 218 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 MEA1Q16626 185 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 TANGO2Q6ICL3 276 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 GJB7Q6PEY0 223 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 LRSAM1Q6UWE0 723 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 LCLAT1Q6UWP7 414 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 TMEM150AQ86TG1 271 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 ARID3BQ8IVW6 561 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-211ENST00000443563 CMTM8Q8IZV2 173 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 MAB21L3Q8N8X9 362 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 ZMIZ2Q8NF64 920 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 SHC3Q92529 594 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 PCMTD1Q96MG8 357 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-211ENST00000443563 ZSWIM3Q96MP5 696 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 HSD3B7Q9H2F3 369 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 CBX8Q9HC52 389 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 TRPC7Q9HCX4 862 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 TLR8Q9NR97 1041 aaKnown RBP11.44□□□□□ -0.58
HDAC6-211ENST00000443563 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.44□□□□□ -0.58
HDAC6-211ENST00000443563 SCML2Q9UQR0 700 aa11.44□□□□□ -0.58
HDAC6-211ENST00000443563 HELZP42694 1942 aaKnown RBP11.44□□□□□ -0.58
HDAC6-211ENST00000443563 HHLA1C9JL84 531 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 M0QYV0 167 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 TADA3O75528 432 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 ABL1P00519 1130 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 SERPINC1P01008 464 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 CKMP06732 381 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 ATP1A3P13637 1013 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 UCHL3P15374 230 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 FCARP24071 287 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 PSEN1P49768 467 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 TUBP50607 506 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 KIF11P52732 1056 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 PFKPQ01813 784 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 SIGLEC14Q08ET2 396 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 RAPGEF1Q13905 1077 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 ZNF268Q14587 947 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-211ENST00000443563 STXBP5Q5T5C0 1151 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 SNX30Q5VWJ9 437 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 TXNDC8Q6A555 127 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 TTC30AQ86WT1 665 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 MFSD6LQ8IWD5 586 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 YAF2Q8IY57 180 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 ARHGAP18Q8N392 663 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 CELF5Q8N6W0 485 aaKnown RBP11.43□□□□□ -0.58
HDAC6-211ENST00000443563 NEK11Q8NG66 645 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 SCAMP5Q8TAC9 235 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 RSAD2Q8WXG1 361 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 ERGIC2Q96RQ1 377 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 KXD1Q9BQD3 176 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 TRMT61BQ9BVS5 477 aaKnown RBP11.43□□□□□ -0.58
HDAC6-211ENST00000443563 C1QTNF1Q9BXJ1 281 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 SLC46A2Q9BY10 475 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 STK33Q9BYT3 514 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 TSPY26PQ9H489 355 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 TDP1Q9NUW8 608 aa11.43□□□□□ -0.58
HDAC6-211ENST00000443563 THG1LQ9NWX6 298 aaKnown RBP11.43□□□□□ -0.58
HDAC6-211ENST00000443563 ZNF840PA6NDX5 716 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 HEPACAM2A8MVW5 462 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 NRG2O14511 850 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-211ENST00000443563 THAP12O43422 761 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 PSMC3P17980 439 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 HDCP19113 662 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 BRD2P25440 801 aaKnown RBP11.42□□□□□ -0.58
HDAC6-211ENST00000443563 PLA2G4AP47712 749 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 APBA1Q02410 837 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 PDE4CQ08493 712 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 DRAP1Q14919 205 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-211ENST00000443563 SYCP1Q15431 976 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 HECTD3Q5T447 861 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 TRIM67Q6ZTA4 783 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 APTXQ7Z2E3 356 aaKnown RBP11.42□□□□□ -0.58
HDAC6-211ENST00000443563 CCDC186Q7Z3E2 898 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 TADA2BQ86TJ2 420 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 PIGZQ86VD9 579 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 FMNL3Q8IVF7 1028 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 ZNF606Q8WXB4 792 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 KCTD13Q8WZ19 329 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 TFAP2BQ92481 460 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 KHSRPQ92945 711 aaKnown RBP eCLIP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms