RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 TNIP3Q96KP6 325 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 SPACA7Q96KW9 195 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 CNOT6LQ96LI5 555 aaKnown RBP14.7□□□□□ -0.06
PTPRE-203ENST00000442830 DUSP9Q99956 384 aaKnown RBP14.7□□□□□ -0.06
PTPRE-203ENST00000442830 DUSP15Q9H1R2 295 aaPredicted RBP14.7□□□□□ -0.06
PTPRE-203ENST00000442830 VRTNQ9H8Y1 702 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 FBRSL1Q9HCM7 1045 aaKnown RBP14.7□□□□□ -0.06
PTPRE-203ENST00000442830 COMMD8Q9NX08 183 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 E2F8A0AVK6 867 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 BCLAF3A2AJT9 711 aaKnown RBP14.69□□□□□ -0.06
PTPRE-203ENST00000442830 A8MXQ7 604 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 F8VP50 259 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 TM4SF5O14894 197 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 CAVIN2O95810 425 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 OAS1P00973 400 aaKnown RBP14.69□□□□□ -0.06
PTPRE-203ENST00000442830 APODP05090 189 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 P4HA1P13674 534 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 PTPN1P18031 435 aaKnown RBP14.69□□□□□ -0.06
PTPRE-203ENST00000442830 GBP1P32455 592 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 TUBP50607 506 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 SHC2P98077 582 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 BMT2Q1RMZ1 405 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 DAB2IPQ5VWQ8 1189 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 ATL3Q6DD88 541 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 TRMT11Q7Z4G4 463 aaKnown RBP14.69□□□□□ -0.06
PTPRE-203ENST00000442830 RASSF3Q86WH2 238 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 NUP93Q8N1F7 819 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 B3GALNT2Q8NCR0 500 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 KCNV2Q8TDN2 545 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 DHX58Q96C10 678 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 CHAMP1Q96JM3 812 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 LSM14BQ9BX40 385 aaKnown RBP14.69□□□□□ -0.06
PTPRE-203ENST00000442830 POLMQ9NP87 494 aaPredicted RBP14.69□□□□□ -0.06
PTPRE-203ENST00000442830 FAM13BQ9NYF5 915 aa14.69□□□□□ -0.06
PTPRE-203ENST00000442830 MYO18AQ92614 2054 aaKnown RBP14.69□□□□□ -0.06
PTPRE-203ENST00000442830 ABCA7Q8IZY2 2146 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 PHACTR2O75167 634 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 YWHAQP27348 245 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 OPRD1P41143 372 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 CYP2J2P51589 502 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 CREB5Q02930 508 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 ST3GAL2Q16842 350 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 SPDYCQ5MJ68 293 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 EOGTQ5NDL2 527 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 PMS2CLQ68D20 193 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 FILIP1Q7Z7B0 1213 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 ADGRG2Q8IZP9 1017 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 PNKPQ96T60 521 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 EDEM2Q9BV94 578 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 DNAI2Q9GZS0 605 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 CPQQ9Y646 472 aa14.68□□□□□ -0.06
PTPRE-203ENST00000442830 MYOFQ9NZM1 2061 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 K7EQS6 105 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 KHNYNO15037 678 aaKnown RBP14.67□□□□□ -0.06
PTPRE-203ENST00000442830 TGFB1I1O43294 461 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 HCRTO43612 131 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 ABL1P00519 1130 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 CYP17A1P05093 508 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 MBL2P11226 248 aaPredicted RBP14.67□□□□□ -0.06
PTPRE-203ENST00000442830 ADH5P11766 374 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 PMLP29590 882 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 HOXD13P35453 343 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 GRIA2P42262 883 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 PI4KAP42356 2102 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 TNFRSF4P43489 277 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 EHHADHQ08426 723 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 TAF10Q12962 218 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 DHCR24Q15392 516 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 CRY1Q16526 586 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 CCDC142Q17RM4 750 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 KNOP1Q1ED39 458 aaKnown RBP14.67□□□□□ -0.06
PTPRE-203ENST00000442830 SNX30Q5VWJ9 437 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 BTBD8Q5XKL5 378 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 CYP2U1Q7Z449 544 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 RDH13Q8NBN7 331 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 WHAMMQ8TF30 809 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 TMEM174Q8WUU8 243 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 SCFD1Q8WVM8 642 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 EZH1Q92800 747 aaPredicted RBP14.67□□□□□ -0.06
PTPRE-203ENST00000442830 FBXO32Q969P5 355 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 CCDC127Q96BQ5 260 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 SMARCD1Q96GM5 515 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 MRPL45Q9BRJ2 306 aaKnown RBP14.67□□□□□ -0.06
PTPRE-203ENST00000442830 LINC00597Q9H2U6 94 aa14.67□□□□□ -0.06
PTPRE-203ENST00000442830 DMAP1Q9NPF5 467 aaPredicted RBP14.67□□□□□ -0.06
PTPRE-203ENST00000442830 TFIP11Q9UBB9 837 aaKnown RBP14.67□□□□□ -0.06
PTPRE-203ENST00000442830 A0A0A0MRY4 1105 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 EXOC3O60645 756 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 CLSTN1O94985 981 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 CST3P01034 146 aaPredicted RBP14.66□□□□□ -0.06
PTPRE-203ENST00000442830 USP46P62068 366 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 GAD2Q05329 585 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 GOLGA8FQ08AF8 430 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 GOLGA8DPQ0D2H9 430 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 BIRC3Q13489 604 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 ZNF699Q32M78 642 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 C2orf27AQ580R0 203 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 ZNF667Q5HYK9 610 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 HECTD3Q5T447 861 aa14.66□□□□□ -0.06
PTPRE-203ENST00000442830 CEP57L1Q8IYX8 460 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms