RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 TMEM8BA6NDV4 472 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 SGK1O00141 431 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 TNFRSF10BO14763 440 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 TRIM66O15016 1216 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 KIAA0391O15091 583 aaKnown RBP12.7□□□□□ -0.38
TNXB-202ENST00000442721 GRIK1P39086 918 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 KIR2DL1P43626 348 aaPredicted RBP12.7□□□□□ -0.38
TNXB-202ENST00000442721 DHPSP49366 369 aaPredicted RBP12.7□□□□□ -0.38
TNXB-202ENST00000442721 SPDYCQ5MJ68 293 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 PEAR1Q5VY43 1037 aaPredicted RBP12.7□□□□□ -0.38
TNXB-202ENST00000442721 RRAGBQ5VZM2 374 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 RHBDF2Q6PJF5 856 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 LPCAT2Q7L5N7 544 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 C12orf40Q86WS4 652 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 SYCP3Q8IZU3 236 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 GPD1LQ8N335 351 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 PHTF2Q8N3S3 785 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 ALLCQ8N6M5 410 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 TXNDC5Q8NBS9 432 aaKnown RBP12.7□□□□□ -0.38
TNXB-202ENST00000442721 MYCBPAPQ8TBZ2 947 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 PIGKQ92643 395 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 PCED1BQ96HM7 432 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 CLIC6Q96NY7 704 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 PNKPQ96T60 521 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 TMEM30AQ9NV96 361 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 EHD2Q9NZN4 543 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 MBD1Q9UIS9 605 aaPredicted RBP12.7□□□□□ -0.38
TNXB-202ENST00000442721 NME7Q9Y5B8 376 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 SRPRBQ9Y5M8 271 aaKnown RBP12.7□□□□□ -0.38
TNXB-202ENST00000442721 CPQQ9Y646 472 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 CLIC4Q9Y696 253 aa12.7□□□□□ -0.38
TNXB-202ENST00000442721 AKAP13Q12802 2813 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 F8VP50 259 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 TULP1O00294 542 aaPredicted RBP12.69□□□□□ -0.38
TNXB-202ENST00000442721 SLC9A3R1O14745 358 aaPredicted RBP12.69□□□□□ -0.38
TNXB-202ENST00000442721 ALDH1A2O94788 518 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 PRPF6O94906 941 aaKnown RBP12.69□□□□□ -0.38
TNXB-202ENST00000442721 KAT7O95251 611 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 KLF8O95600 359 aaPredicted RBP12.69□□□□□ -0.38
TNXB-202ENST00000442721 TNNC2P02585 160 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 PDGFRBP09619 1106 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 SLC6A11P48066 632 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 LMAN2Q12907 356 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 RESTQ13127 1097 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 SURF1Q15526 300 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 MAP7D1Q3KQU3 841 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 TRIM61Q5EBN2 209 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 PIP4P1Q86T03 277 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 SYT12Q8IV01 421 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 DEFB124Q8NES8 71 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 WHAMMQ8TF30 809 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 RLN3Q8WXF3 142 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 SPACA7Q96KW9 195 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 C8orf48Q96LL4 319 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 SCNM1Q9BWG6 230 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 TMEM74BQ9NUR3 256 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.69□□□□□ -0.38
TNXB-202ENST00000442721 WDFY3Q8IZQ1 3526 aa12.69□□□□□ -0.38
TNXB-202ENST00000442721 A0A087X0B3 334 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 UPK3BL1B0FP48 263 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 UPK3BL2E5RIL1 263 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 ADAM23O75077 832 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 TACC1O75410 805 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 ADH1CP00326 375 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 APODP05090 189 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 FAM163BP0C2L3 166 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 IDEP14735 1019 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 ANXA13P27216 316 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 TIE1P35590 1138 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 GRIA2P42262 883 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 PTGER3P43115 390 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 TNFRSF4P43489 277 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 CACNA2D1P54289 1103 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 TAF10Q12962 218 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 DUOXA2Q1HG44 320 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 UAP1L1Q3KQV9 507 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 MDH1BQ5I0G3 518 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 EOGTQ5NDL2 527 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 EMC10Q5UCC4 262 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 SLC23A3Q6PIS1 610 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 DDX42Q86XP3 938 aaKnown RBP eCLIP12.68□□□□□ -0.38
TNXB-202ENST00000442721 CBWD2Q8IUF1 395 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 WDR49Q8IV35 697 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 FRMD1Q8N878 549 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 GLIS3Q8NEA6 775 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 NOC3LQ8WTT2 800 aaKnown RBP12.68□□□□□ -0.38
TNXB-202ENST00000442721 MRPL45Q9BRJ2 306 aaKnown RBP12.68□□□□□ -0.38
TNXB-202ENST00000442721 NUSAP1Q9BXS6 441 aaKnown RBP12.68□□□□□ -0.38
TNXB-202ENST00000442721 POLMQ9NP87 494 aaPredicted RBP12.68□□□□□ -0.38
TNXB-202ENST00000442721 PANK4Q9NVE7 773 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 SMPD4Q9NXE4 827 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 CFAP97Q9P2B7 532 aa12.68□□□□□ -0.38
TNXB-202ENST00000442721 MORC2Q9Y6X9 1032 aaPredicted RBP12.68□□□□□ -0.38
TNXB-202ENST00000442721 PCDH15Q96QU1 1955 aa12.67□□□□□ -0.38
TNXB-202ENST00000442721 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.67□□□□□ -0.38
TNXB-202ENST00000442721 E2F8A0AVK6 867 aa12.67□□□□□ -0.38
TNXB-202ENST00000442721 ZNF233A6NK53 670 aa12.67□□□□□ -0.38
TNXB-202ENST00000442721 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.67□□□□□ -0.38
TNXB-202ENST00000442721 SCAMP3O14828 347 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms