RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 SIX2Q9NPC8 291 aa15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 TAB2Q9NYJ8 693 aa15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 HESX1Q9UBX0 185 aa15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 TSPAN16Q9UKR8 245 aa15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 DAAM1Q9Y4D1 1078 aa15.9■□□□□ 0.14
CSNK1E-210ENST00000442216 RNF225M0QZC1 329 aaPredicted RBP15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 O00370 1275 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 CD19P15391 556 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 PSMC3P17980 439 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 AVPR1AP37288 418 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 COPB1P53618 953 aaKnown RBP15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 BCAT1P54687 386 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 TAF10Q12962 218 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 ZNF268Q14587 947 aaPredicted RBP15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 CNGA2Q16280 664 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 ZSCAN23Q3MJ62 389 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 FKBP15Q5T1M5 1219 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 TXNDC8Q6A555 127 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 DPY19L2P1Q6NXN4 242 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 LCLAT1Q6UWP7 414 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 MFSD6LQ8IWD5 586 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 DHX40Q8IX18 779 aaKnown RBP15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 MAB21L3Q8N8X9 362 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 SHC3Q92529 594 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 FBXO32Q969P5 355 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 KXD1Q9BQD3 176 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 VPS16Q9H269 839 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 KIF9Q9HAQ2 790 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 PLCB1Q9NQ66 1216 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 WNT16Q9UBV4 365 aa15.89■□□□□ 0.13
CSNK1E-210ENST00000442216 TRAV19A0A0A6YYK7 116 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 ZNF840PA6NDX5 716 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 BECN2A8MW95 431 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 DPYSL4O14531 572 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 USP17L7P0C7H9 530 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 ZDHHC11BP0C7U3 371 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 SETSIPP0DME0 302 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 PFKPQ01813 784 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 BST2Q10589 180 aaKnown RBP15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 MEA1Q16626 185 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 VITQ6UXI7 678 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 BMP8AQ7Z5Y6 402 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 CELF5Q8N6W0 485 aaKnown RBP15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 SCAMP5Q8TAC9 235 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 PLA2G2FQ9BZM2 168 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 DNAJC12Q9UKB3 198 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 SCML2Q9UQR0 700 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 TICRRQ7Z2Z1 1910 aa15.88■□□□□ 0.13
CSNK1E-210ENST00000442216 LGALS16A8MUM7 142 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 HEPACAM2A8MVW5 462 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 XPO1O14980 1071 aaKnown RBP15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 NARSO43776 548 aaKnown RBP15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 OLFM2O95897 454 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 KRT5P13647 590 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 TCF3P15923 654 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 TUBP50607 506 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 KIF11P52732 1056 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 FCHO2Q0JRZ9 810 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 IFRD2Q12894 506 aaPredicted RBP15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 IQCB1Q15051 598 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 NFKBIBQ15653 356 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 GOLGA7BQ2TAP0 167 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 PKDCCQ504Y2 493 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 RAB41Q5JT25 222 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 KLHDC7AQ5VTJ3 777 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 GJB7Q6PEY0 223 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 APTXQ7Z2E3 356 aaKnown RBP15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 TTC30AQ86WT1 665 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 TFAP2BQ92481 460 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 ASIC4Q96FT7 647 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 TRMT61BQ9BVS5 477 aaKnown RBP15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 SMOC2Q9H3U7 446 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 TRPV5Q9NQA5 729 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 TLR8Q9NR97 1041 aaKnown RBP15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 TDP1Q9NUW8 608 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 USP3Q9Y6I4 520 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 COL4A2P08572 1712 aa15.87■□□□□ 0.13
CSNK1E-210ENST00000442216 TMEM221A6NGB7 291 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 PRR33A8MZF0 331 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 M0R296 226 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 MED7O43513 233 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 OAS1P00973 400 aaKnown RBP15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 UCHL3P15374 230 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 HDCP19113 662 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 VIPR2P41587 438 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 PLA2G4AP47712 749 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 PSEN1P49768 467 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 GPC5P78333 572 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 APBA1Q02410 837 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 PDE4CQ08493 712 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 ARHGAP44Q17R89 818 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 TMEM31Q5JXX7 168 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 GPRIN1Q7Z2K8 1008 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 CCDC186Q7Z3E2 898 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 PIGZQ86VD9 579 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 ZNF276Q8N554 614 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 KIAA1958Q8N8K9 716 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 BPIFB1Q8TDL5 484 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 KCTD13Q8WZ19 329 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms