RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 CEP83Q9Y592 693 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 A0A0B4J269 797 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 FAM234BA2RU67 622 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 CCDC151A5D8V7 595 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 MPPED1O15442 326 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 PIP5K1CO60331 668 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 PLA2G6O60733 806 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 PDHA1P08559 390 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 ZNF37AP17032 561 aaPredicted RBP4.2□□□□□ -1.74
VPS41-207ENST00000439468 IL1R2P27930 398 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 VIPR2P41587 438 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 TECP42680 631 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 PXNP49023 591 aaPredicted RBP4.2□□□□□ -1.74
VPS41-207ENST00000439468 HNRNPMP52272 730 aaKnown RBP eCLIP4.2□□□□□ -1.74
VPS41-207ENST00000439468 C21orf58P58505 322 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 KRT17Q04695 432 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 BTKQ06187 659 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 TUBB3Q13509 450 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 SLC29A2Q14542 456 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 HLXQ14774 488 aaPredicted RBP4.2□□□□□ -1.74
VPS41-207ENST00000439468 STARD3Q14849 445 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 ELF2Q15723 593 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 NPY5RQ15761 445 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 ZNF362Q5T0B9 420 aaPredicted RBP4.2□□□□□ -1.74
VPS41-207ENST00000439468 TSTD2Q5T7W7 516 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 ARHGAP40Q5TG30 622 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 FCRL6Q6DN72 434 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 GAS2L3Q86XJ1 694 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 MYLK4Q86YV6 388 aaPredicted RBP4.2□□□□□ -1.74
VPS41-207ENST00000439468 FAM9AQ8IZU1 332 aaPredicted RBP4.2□□□□□ -1.74
VPS41-207ENST00000439468 GLIS1Q8NBF1 620 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 PPP2R3CQ969Q6 453 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 PGBD1Q96JS3 809 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 COLEC11Q9BWP8 271 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 TTLL2Q9BWV7 592 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 CPNE5Q9HCH3 593 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 SERHLQ9NQF3 203 aa4.2□□□□□ -1.74
VPS41-207ENST00000439468 MAGED2Q9UNF1 606 aaPredicted RBP4.2□□□□□ -1.74
VPS41-207ENST00000439468 FER1L4A9Z1Z3 1794 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 AQP12BA6NM10 295 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 THAP12O43422 761 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 TRIAP1O43715 76 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 ITGALP20701 1170 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 ACVR2AP27037 513 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 ADORA2AP29274 412 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 CHKAP35790 457 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 GRIA3P42263 894 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 HALP42357 657 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 PTDSS1P48651 473 aaKnown RBP4.19□□□□□ -1.74
VPS41-207ENST00000439468 NDUFV1P49821 464 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 CPT1AP50416 773 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 TNFAIP2Q03169 654 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 ITIH3Q06033 890 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 MYO1EQ12965 1108 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 ARHGEF7Q14155 803 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 PUM3Q15397 648 aaKnown RBP4.19□□□□□ -1.74
VPS41-207ENST00000439468 NBPF8Q3BBV2 869 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 FAM153CQ494X1 144 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 ARHGAP15Q53QZ3 475 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 RBM20Q5T481 1227 aaKnown RBP4.19□□□□□ -1.74
VPS41-207ENST00000439468 CACHD1Q5VU97 1274 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 ANO1Q5XXA6 986 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 RAP1GAP2Q684P5 730 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 PLAG1Q6DJT9 500 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 CRTC1Q6UUV9 634 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 LAYNQ6UX15 382 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 CATSPERGQ6ZRH7 1159 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 BPIFB1Q8TDL5 484 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 IPO4Q8TEX9 1081 aaKnown RBP4.19□□□□□ -1.74
VPS41-207ENST00000439468 TMEM171Q8WVE6 324 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 VOPP1Q96AW1 172 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 PPP1R9BQ96SB3 815 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 CXorf36Q9H7Y0 433 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 GBA2Q9HCG7 927 aaPredicted RBP4.19□□□□□ -1.74
VPS41-207ENST00000439468 SEMA4GQ9NTN9 838 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 IGSF9Q9P2J2 1179 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 DNMT3BQ9UBC3 853 aaKnown RBP4.19□□□□□ -1.74
VPS41-207ENST00000439468 SERTAD3Q9UJW9 196 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 SLC39A10Q9ULF5 831 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 NDRG4Q9ULP0 352 aaKnown RBP4.19□□□□□ -1.74
VPS41-207ENST00000439468 ST3GAL5Q9UNP4 418 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 SSX2IPQ9Y2D8 614 aa4.19□□□□□ -1.74
VPS41-207ENST00000439468 LOC102723971A0A1B0GUV8 181 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 ADM5C9JUS6 153 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 E7ENX8 843 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 PODXLO00592 558 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 AREL1O15033 823 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 ADAMTS3O15072 1205 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 PPM1DO15297 605 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 PROM1O43490 865 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 RRP9O43818 475 aaKnown RBP4.18□□□□□ -1.74
VPS41-207ENST00000439468 RASAL1O95294 804 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 ATXN1LP0C7T5 689 aaKnown RBP4.18□□□□□ -1.74
VPS41-207ENST00000439468 TPH1P17752 444 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 GPD1P21695 349 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 KCNA3P22001 575 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 FBLP22087 321 aaKnown RBP4.18□□□□□ -1.74
VPS41-207ENST00000439468 YY1P25490 414 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 GABRB3P28472 473 aa4.18□□□□□ -1.74
VPS41-207ENST00000439468 PDIA3P30101 505 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms