RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ZNF280BQ86YH2 543 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 KIAA0319LQ8IZA0 1049 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 PCSK9Q8NBP7 692 aaKnown RBP4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 ATG4AQ8WYN0 398 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 TBC1D5Q92609 795 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 P2RX7Q99572 595 aaKnown RBP4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 TMEM60Q9H2L4 133 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 FAM204AQ9H8W3 233 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 ZMAT3Q9HA38 289 aaKnown RBP4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 SMURF2Q9HAU4 748 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 CNNM1Q9NRU3 951 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 SERGEFQ9UGK8 458 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 SERTAD3Q9UJW9 196 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 L1RE1Q9UN81 338 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 SHOC2Q9UQ13 582 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 PCDHGB6Q9Y5F9 930 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 MAGI2Q86UL8 1455 aa4.09□□□□□ -1.75
HMGB3P12-201ENST00000438745 CFAP69A5D8W1 941 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 H0YIZ8 118 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 BTN3A1O00481 513 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 TPP1O14773 563 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 ATP10AO60312 1499 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 JTBO76095 146 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 HNRNPCP07910 306 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 CELA2AP08217 269 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 DGKEP52429 567 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 SSBP2P81877 361 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 MYO1EQ12965 1108 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 CNN3Q15417 329 aaKnown RBP4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 ZIK1Q3SY52 487 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 COBLL1Q53SF7 1204 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 TREML2Q5T2D2 321 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 KIAA1614Q5VZ46 1190 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 CEP85Q6P2H3 762 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 MAEAQ7L5Y9 396 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 AMIGO2Q86SJ2 522 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 IL31RAQ8NI17 732 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 RP9Q8TA86 221 aaKnown RBP4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 APOL5Q9BWW9 433 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 XPNPEP3Q9NQH7 507 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 DUSP22Q9NRW4 184 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 CDK12Q9NYV4 1490 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 FLRT1Q9NZU1 646 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 PADI4Q9UM07 663 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 ALKQ9UM73 1620 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 GABRQQ9UN88 632 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 RAPGEF2Q9Y4G8 1499 aa4.08□□□□□ -1.76
HMGB3P12-201ENST00000438745 RAPGEF6Q8TEU7 1601 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 TCOF1Q13428 1488 aaKnown RBP4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 JCADQ9P266 1359 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 A1L4Q6 167 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 CAPN8A6NHC0 703 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 MANSC4A6NHS7 340 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 FAM227AF5H4B4 570 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 hCG_1984214I3L0E3 225 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 MYO1FO00160 1098 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 PHGDHO43175 533 aaKnown RBP4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 EBLN1P0CF75 366 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 KITP10721 976 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 NDUFB7P17568 137 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 EN2P19622 333 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 LMO1P25800 156 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 EIF2B5Q13144 721 aaKnown RBP4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 PROSER3Q2NL68 480 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 MAP9Q49MG5 647 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 LRCH2Q5VUJ6 765 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 LMBRD2Q68DH5 695 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 RGS7BPQ6MZT1 257 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 SWSAP1Q6NVH7 229 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 PARS2Q7L3T8 475 aaKnown RBP4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 SLC15A4Q8N697 577 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 DNAJC5GQ8N7S2 189 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 THAP7Q9BT49 309 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 C22orf23Q9BZE7 217 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 MRPS17Q9Y2R5 130 aaKnown RBP4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 SIGLEC1Q9BZZ2 1709 aa4.07□□□□□ -1.76
HMGB3P12-201ENST00000438745 RNF17Q9BXT8 1623 aaKnown RBP4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 IQGAP2Q13576 1575 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 ZMYM4Q5VZL5 1548 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 A0A1W2PPL8 197 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 LINC01548A6NM66 108 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 APAF1O14727 1248 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 FRS3O43559 492 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 MAP4K4O95819 1239 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 MYL1P05976 194 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 MYL3P08590 195 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 CDK4P11802 303 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 RHCEP18577 417 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 KCNA3P22001 575 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 CYP2C18P33260 490 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 EEFSECP57772 596 aaKnown RBP4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 RHDQ02161 417 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 SRSF4Q08170 494 aaKnown RBP4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 RNF220Q5VTB9 566 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 SUMO4Q6EEV6 95 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 MTHFD1LQ6UB35 978 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 ZNF783Q6ZMS7 281 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 CHST15Q7LFX5 561 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 ABRAQ8N0Z2 381 aa4.06□□□□□ -1.76
HMGB3P12-201ENST00000438745 OR6B3Q8NGW1 331 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms