RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 AMFRQ9UKV5 643 aa7.57□□□□□ -1.2
HMGN1P6-201ENST00000438508 V9GYY5 206 aaPredicted RBP7.57□□□□□ -1.2
HMGN1P6-201ENST00000438508 MROH7Q68CQ1 1323 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 C17orf102A2RUQ5 167 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 CCDC151A5D8V7 595 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 ZNF185O15231 689 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 SEPT4O43236 478 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 BUB1BO60566 1050 aaPredicted RBP7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 ERLIN2O94905 339 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 ZRANB2O95218 330 aaKnown RBP eCLIP7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 TMEM191BP0C7N4 346 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 CXCL8P10145 99 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 MYBL1P10243 752 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 CDH5P33151 784 aaPredicted RBP7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 FLT3LGP49771 235 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 CRYBB1P53674 252 aaPredicted RBP7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 RBM10P98175 930 aaKnown RBP7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 DEFB115Q30KQ5 88 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 XKR4Q5GH76 650 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 TEX35Q5T0J7 233 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 SCARA3Q6AZY7 606 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 SPOPLQ6IQ16 392 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 C11orf63Q6NUN7 778 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 TAF2Q6P1X5 1199 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 FBXO38Q6PIJ6 1188 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 PEX26Q7Z412 305 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 SESTD1Q86VW0 696 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 PHF13Q86YI8 300 aaPredicted RBP7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 TMEM192Q8IY95 271 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 MCOLN2Q8IZK6 566 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 TTC39CQ8N584 583 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 C2CD4AQ8NCU7 369 aaPredicted RBP7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 KLHDC9Q8NEP7 349 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 SPATA4Q8NEY3 305 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 ARHGEF26Q96DR7 871 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 ZNF668Q96K58 619 aaPredicted RBP7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 MTG1Q9BT17 334 aaPredicted RBP7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 NIF3L1Q9GZT8 377 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 THAP2Q9H0W7 228 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 LRRC4CQ9HCJ2 640 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 ACP6Q9NPH0 428 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 ARGLU1Q9NWB6 273 aaPredicted RBP7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 LRFN2Q9ULH4 789 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 ABT1Q9ULW3 272 aaKnown RBP7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 GABRQQ9UN88 632 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 COG5Q9UP83 839 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 PCDHB4Q9Y5E5 795 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 ALG6Q9Y672 507 aa7.56□□□□□ -1.2
HMGN1P6-201ENST00000438508 TMCO5BA8MYB1 307 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 MIF4GDA9UHW6 222 aaKnown RBP7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 TREHO43280 583 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 NCK2O43639 380 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 CSDE1O75534 798 aaKnown RBP7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 FTCDO95954 541 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 TFRCP02786 760 aaKnown RBP7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 MYL3P08590 195 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 PAEPP09466 180 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 FAM163BP0C2L3 166 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 HARSP12081 509 aaKnown RBP7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 KRT5P13647 590 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 MCM3P25205 808 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 CST5P28325 142 aaPredicted RBP7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 HOXD10P28358 340 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 RBP5P82980 135 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 TFAMQ00059 246 aaKnown RBP7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 BEX3Q00994 111 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 SP3Q02447 781 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 SNX17Q15036 470 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 CLUL1Q15846 466 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 KIZQ2M2Z5 673 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 ZNF667Q5HYK9 610 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 JADE1Q6IE81 842 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 CCSAPQ6IQ19 270 aaPredicted RBP7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 NOTUMQ6P988 496 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 SLC27A1Q6PCB7 646 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 TMEM270Q6UE05 265 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 RUFY4Q6ZNE9 571 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 ZNF765Q7L2R6 523 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 DAAM2Q86T65 1068 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 CDR2LQ86X02 465 aaPredicted RBP7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 DNAAF5Q86Y56 855 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 C1orf127Q8N9H9 656 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 NOA1Q8NC60 698 aaKnown RBP7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 RBBP8NLQ8NC74 664 aaPredicted RBP7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 DNAJB3Q8WWF6 145 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 TRIB2Q92519 343 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 CYFIP2Q96F07 1278 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 CPB2Q96IY4 423 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 ARID3AQ99856 593 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 HINFPQ9BQA5 517 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 CCDC94Q9BW85 323 aaPredicted RBP7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 MTMR12Q9C0I1 747 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 WNT8AQ9H1J5 351 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 LHX5Q9H2C1 402 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 SPC25Q9HBM1 224 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 ITGA11Q9UKX5 1188 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 KIAA1257Q9ULG3 409 aa7.55□□□□□ -1.2
HMGN1P6-201ENST00000438508 UMODL1Q5DID0 1318 aa7.54□□□□□ -1.2
HMGN1P6-201ENST00000438508 CCDC188H7C350 402 aa7.54□□□□□ -1.2
HMGN1P6-201ENST00000438508 RRP9O43818 475 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms