RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 PTPRDP23468 1912 aa17.31■□□□□ 0.36
CTSD-205ENST00000438213 ZNF840PA6NDX5 716 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 PRR33A8MZF0 331 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 CFHP08603 1231 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 USP17L7P0C7H9 530 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 KRT5P13647 590 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 HDCP19113 662 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 ZNF165P49910 485 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 CNGA2Q16280 664 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 FKBP15Q5T1M5 1219 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 BMP8AQ7Z5Y6 402 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 GPIHBP1Q8IV16 184 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 RBBP8NLQ8NC74 664 aaPredicted RBP17.3■□□□□ 0.36
CTSD-205ENST00000438213 PBXIP1Q96AQ6 731 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 BRD9Q9H8M2 597 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 TDP1Q9NUW8 608 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 THG1LQ9NWX6 298 aaKnown RBP17.3■□□□□ 0.36
CTSD-205ENST00000438213 TAB2Q9NYJ8 693 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 CHORDC1Q9UHD1 332 aaPredicted RBP17.3■□□□□ 0.36
CTSD-205ENST00000438213 CNTN6Q9UQ52 1028 aa17.3■□□□□ 0.36
CTSD-205ENST00000438213 SYCE3A1L190 88 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 FAM92AA1XBS5 289 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 FAM86C2PA6NEL3 165 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 LRRC10BA6NIK2 292 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 BECN2A8MW95 431 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 RNF225M0QZC1 329 aaPredicted RBP17.29■□□□□ 0.36
CTSD-205ENST00000438213 ZNF263O14978 683 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 TADA3O75528 432 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 CKMP06732 381 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 BCAT1P54687 386 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 ZNF268Q14587 947 aaPredicted RBP17.29■□□□□ 0.36
CTSD-205ENST00000438213 ARHGAP44Q17R89 818 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 GOLGA7BQ2TAP0 167 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 LCLAT1Q6UWP7 414 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 VITQ6UXI7 678 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 AOPEPQ8N6M6 819 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 IRF7Q92985 503 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 ASIC4Q96FT7 647 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 CYP2S1Q96SQ9 504 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 KIF9Q9HAQ2 790 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 LIMA1Q9UHB6 759 aaKnown RBP17.29■□□□□ 0.36
CTSD-205ENST00000438213 TSPAN16Q9UKR8 245 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 MYH10P35580 1976 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 MUC3AQ02505 3323 aa17.29■□□□□ 0.36
CTSD-205ENST00000438213 NCANO14594 1321 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 TECTAO75443 2155 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 HHLA1C9JL84 531 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 O00370 1275 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 GDI1P31150 447 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 USP8P40818 1118 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 KIF11P52732 1056 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 BST2Q10589 180 aaKnown RBP17.28■□□□□ 0.36
CTSD-205ENST00000438213 GRM2Q14416 872 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 NCAPHQ15003 741 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 SNX30Q5VWJ9 437 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 GJB7Q6PEY0 223 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 ARL14EPQ8N8R7 260 aaPredicted RBP17.28■□□□□ 0.36
CTSD-205ENST00000438213 BPIFB1Q8TDL5 484 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 USP13Q92995 863 aaPredicted RBP17.28■□□□□ 0.36
CTSD-205ENST00000438213 SHDQ96IW2 340 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 LRFN3Q9BTN0 628 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 MFSD1Q9H3U5 465 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 C11orf16Q9NQ32 467 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 TLR8Q9NR97 1041 aaKnown RBP17.28■□□□□ 0.36
CTSD-205ENST00000438213 DNAJC12Q9UKB3 198 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 SCML2Q9UQR0 700 aa17.28■□□□□ 0.36
CTSD-205ENST00000438213 C2orf78A6NCI8 922 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 XPO1O14980 1071 aaKnown RBP17.27■□□□□ 0.36
CTSD-205ENST00000438213 CHADO15335 359 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 MED7O43513 233 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 CAVIN2O95810 425 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 SETSIPP0DME0 302 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 ZNF18P17022 549 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 ZNF132P52740 706 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 COPB1P53618 953 aaKnown RBP17.27■□□□□ 0.36
CTSD-205ENST00000438213 PLCB2Q00722 1185 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 FCHO2Q0JRZ9 810 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 KCNMA1Q12791 1236 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 ARHGAP29Q52LW3 1261 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 SLC44A4Q53GD3 710 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 HECTD3Q5T447 861 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 CC2D1AQ6P1N0 951 aaPredicted RBP17.27■□□□□ 0.36
CTSD-205ENST00000438213 PIGZQ86VD9 579 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 SIX5Q8N196 739 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 UBA3Q8TBC4 463 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 TFAP2BQ92481 460 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 DNASE1L2Q92874 299 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 FUCA2Q9BTY2 467 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 SMG9Q9H0W8 520 aaKnown RBP17.27■□□□□ 0.36
CTSD-205ENST00000438213 SIX2Q9NPC8 291 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 TRPV5Q9NQA5 729 aa17.27■□□□□ 0.36
CTSD-205ENST00000438213 GREB1Q4ZG55 1949 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 STK25O00506 426 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 PRAMEF12O95522 483 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 ZDHHC11BP0C7U3 371 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 RFX1P22670 979 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 BRD2P25440 801 aaKnown RBP17.26■□□□□ 0.35
CTSD-205ENST00000438213 PSEN1P49768 467 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 APBA1Q02410 837 aa17.26■□□□□ 0.35
CTSD-205ENST00000438213 PDE4CQ08493 712 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms