RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 FHOD1Q9Y613 1164 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 CHD9Q3L8U1 2897 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 PES1O00541 588 aaKnown RBP12.12□□□□□ -0.47
SNHG3-202ENST00000437681 ATP2C2O75185 946 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 RHOP08100 348 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 KCNA5P22460 613 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 BDNFP23560 247 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 ZBED6P86452 979 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 CDK17Q00537 523 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 RRAGAQ7L523 313 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 VSTM4Q8IW00 320 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 STKLD1Q8NE28 680 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 PDLIM2Q96JY6 352 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 SLITRK1Q96PX8 696 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 SEPT5Q99719 369 aaPredicted RBP12.12□□□□□ -0.47
SNHG3-202ENST00000437681 CRACR2AQ9BSW2 395 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 CRISPLD1Q9H336 500 aa12.12□□□□□ -0.47
SNHG3-202ENST00000437681 ANHXE9PGG2 379 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 ECI2O75521 394 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 OLFM2O95897 454 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 TPM1P09493 284 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 BMP1P13497 986 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 CYP2F1P24903 491 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 GABRB2P47870 512 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 DLX2Q07687 328 aaPredicted RBP12.11□□□□□ -0.47
SNHG3-202ENST00000437681 LRMPQ12912 555 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 TDRD5Q8NAT2 981 aaKnown RBP12.11□□□□□ -0.47
SNHG3-202ENST00000437681 C1orf131Q8NDD1 294 aaKnown RBP12.11□□□□□ -0.47
SNHG3-202ENST00000437681 ZNF606Q8WXB4 792 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 BAP1Q92560 729 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 TSC1Q92574 1164 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 MSANTD3Q96H12 275 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 SPAG5Q96R06 1193 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 SLC4A5Q9BY07 1137 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 TASP1Q9H6P5 420 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 IL21Q9HBE4 155 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 TRPV5Q9NQA5 729 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 OLA1Q9NTK5 396 aaKnown RBP12.11□□□□□ -0.47
SNHG3-202ENST00000437681 TSPAN16Q9UKR8 245 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 ZNF638Q14966 1978 aaKnown RBP12.11□□□□□ -0.47
SNHG3-202ENST00000437681 TRANK1O15050 2925 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 FOXN3O00409 490 aaPredicted RBP12.11□□□□□ -0.47
SNHG3-202ENST00000437681 KRT5P13647 590 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 YWHAQP27348 245 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 KIF11P52732 1056 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 CCDC85BQ15834 202 aaPredicted RBP12.11□□□□□ -0.47
SNHG3-202ENST00000437681 TAF12Q16514 161 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 GOLGA7BQ2TAP0 167 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 SPECC1LQ69YQ0 1117 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 CACNA2D4Q7Z3S7 1137 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 TMEM110Q86TL2 294 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 MON1AQ86VX9 555 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 MYRIPQ8NFW9 859 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 VCPIP1Q96JH7 1222 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 MYO16Q9Y6X6 1858 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 ANAPC1Q9H1A4 1944 aa12.11□□□□□ -0.47
SNHG3-202ENST00000437681 RBAK-RBAKDNI3L0D1 243 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 RNF225M0QZC1 329 aaPredicted RBP12.1□□□□□ -0.47
SNHG3-202ENST00000437681 CCL16O15467 120 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 LRRN2O75325 713 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 CYP11B1P15538 503 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 POLR2FP61218 127 aaKnown RBP12.1□□□□□ -0.47
SNHG3-202ENST00000437681 CDR2Q01850 454 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 NNTQ13423 1086 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 ACBD5Q5T8D3 534 aaPredicted RBP12.1□□□□□ -0.47
SNHG3-202ENST00000437681 ZMIZ2Q8NF64 920 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 DDX1Q92499 740 aaKnown RBP12.1□□□□□ -0.47
SNHG3-202ENST00000437681 ELSPBP1Q96BH3 223 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 TLR8Q9NR97 1041 aaKnown RBP12.1□□□□□ -0.47
SNHG3-202ENST00000437681 RRN3Q9NYV6 651 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 TRPM5Q9NZQ8 1165 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 IFNKQ9P0W0 207 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 TEX33O43247 280 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 CCDC130P13994 396 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 GPD2P43304 727 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 SLC7A9P82251 487 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 TMEM35BQ8NCS4 154 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 DEPDC1BQ8WUY9 529 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 MRPS31Q92665 395 aaKnown RBP12.1□□□□□ -0.47
SNHG3-202ENST00000437681 KAT5Q92993 513 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 PCMTD1Q96MG8 357 aaPredicted RBP12.1□□□□□ -0.47
SNHG3-202ENST00000437681 PGLYRP2Q96PD5 576 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 WDR35Q9P2L0 1181 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 IMPACTQ9P2X3 320 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 LCMT1Q9UIC8 334 aa12.1□□□□□ -0.47
SNHG3-202ENST00000437681 NOCTQ9UK39 431 aaKnown RBP12.1□□□□□ -0.47
SNHG3-202ENST00000437681 F8VP50 259 aa12.09□□□□□ -0.47
SNHG3-202ENST00000437681 RFPL2O75678 378 aa12.09□□□□□ -0.47
SNHG3-202ENST00000437681 CYP1A1P04798 512 aaPredicted RBP12.09□□□□□ -0.47
SNHG3-202ENST00000437681 KPNA1P52294 538 aaPredicted RBP12.09□□□□□ -0.47
SNHG3-202ENST00000437681 ZP2Q05996 745 aa12.09□□□□□ -0.47
SNHG3-202ENST00000437681 C1orf228Q6PIY5 440 aa12.09□□□□□ -0.47
SNHG3-202ENST00000437681 TTC30AQ86WT1 665 aa12.09□□□□□ -0.47
SNHG3-202ENST00000437681 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.09□□□□□ -0.47
SNHG3-202ENST00000437681 EPS8L1Q8TE68 723 aa12.09□□□□□ -0.47
SNHG3-202ENST00000437681 XPO4Q9C0E2 1151 aaKnown RBP12.09□□□□□ -0.47
SNHG3-202ENST00000437681 SLC27A5Q9Y2P5 690 aa12.09□□□□□ -0.47
SNHG3-202ENST00000437681 MRPS23Q9Y3D9 190 aaKnown RBP12.09□□□□□ -0.47
SNHG3-202ENST00000437681 PRRC2BQ5JSZ5 2229 aaKnown RBP12.09□□□□□ -0.47
SNHG3-202ENST00000437681 THAP12O43422 761 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms