RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 XRCC6P12956 609 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 HTR6P50406 440 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 PRKAG1P54619 331 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 UCP3P55916 312 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 WNT3P56703 355 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 SUMO2P61956 95 aaKnown RBP4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 PSG6Q00889 435 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 ID2Q02363 134 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 SEMA3AQ14563 771 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 LY6KQ17RY6 165 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 C4orf46Q504U0 113 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 ZNF280BQ86YH2 543 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 CELF5Q8N6W0 485 aaKnown RBP4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 CDK5RAP3Q96JB5 506 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 LYZL4Q96KX0 146 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 SIGLEC11Q96RL6 698 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 ALG1L2C9J202 215 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 IL33O95760 270 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 FGAP02671 866 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 SLC11A2P49281 568 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 DGKEP52429 567 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 ZIK1Q3SY52 487 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 LEXMQ3ZCV2 418 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 RNF187Q5TA31 235 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 ANO7Q6IWH7 933 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 C9orf47Q6ZRZ4 202 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 ANKRD13BQ86YJ7 626 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 ZNF398Q8TD17 642 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 MAP4K1Q92918 833 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 RSPRY1Q96DX4 576 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 MESP1Q9BRJ9 268 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 CPA4Q9UI42 421 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 MED16Q9Y2X0 877 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 SPEF1Q9Y4P9 236 aa4.06□□□□□ -1.76
HMGB1P31-201ENST00000437242 MT-CO3P00414 261 aa4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 CRYABP02511 175 aaKnown RBP4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 THP07101 528 aa4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 PSG1P11464 419 aa4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 KCNA3P22001 575 aa4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 GKP32189 559 aa4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 NANOS2P60321 138 aaKnown RBP4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 SRSF1Q07955 248 aaKnown RBP eCLIP4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 AWAT1Q58HT5 328 aa4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 DENND2CQ68D51 928 aa4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 TMEM65Q6PI78 240 aa4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 PIP4P1Q86T03 277 aa4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 PIM3Q86V86 326 aa4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 PRPF38AQ8NAV1 312 aaKnown RBP4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 PNISRQ8TF01 805 aaKnown RBP4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 TMEM171Q8WVE6 324 aa4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 MVB12AQ96EY5 273 aa4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 C17orf80Q9BSJ5 609 aa4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 GTPBP4Q9BZE4 634 aaKnown RBP4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 TMEM184CQ9NVA4 438 aa4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 STXBP5LQ9Y2K9 1186 aa4.05□□□□□ -1.76
HMGB1P31-201ENST00000437242 ME1P48163 572 aa4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 COPB1P53618 953 aaKnown RBP4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 LMAN2Q12907 356 aa4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 LARS2Q15031 903 aaKnown RBP4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 TMEM240Q5SV17 173 aa4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 CERCAMQ5T4B2 595 aa4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 LVRNQ6Q4G3 990 aa4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 DEF8Q6ZN54 512 aa4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 HSPBAP1Q96EW2 488 aa4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 VPS33BQ9H267 617 aa4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 HIPK2Q9H2X6 1198 aa4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 ARMT1Q9H993 441 aa4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 SNX15Q9NRS6 342 aa4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 HEY2Q9UBP5 337 aa4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 ZNF112Q9UJU3 913 aa4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 HS3ST3B1Q9Y662 390 aa4.04□□□□□ -1.76
HMGB1P31-201ENST00000437242 CADPSQ9ULU8 1353 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 B4DGG1 531 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 M0R3H8 397 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 TLR2O60603 784 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 PMPCBO75439 489 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 TOMM40O96008 361 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 RPS13P62277 151 aaKnown RBP4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 ERV3-1Q14264 604 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 NPY5RQ15761 445 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 TMEM63BQ5T3F8 832 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 TMTC4Q5T4D3 741 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 LMBRD2Q68DH5 695 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 DCDC5Q6ZRR9 648 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 PTCHD4Q6ZW05 846 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 GAS2L3Q86XJ1 694 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 LIX1LQ8IVB5 337 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 SLC15A4Q8N697 577 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 ARFGAP1Q8N6T3 406 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 DNAJC5GQ8N7S2 189 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 ZNF548Q8NEK5 533 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 BPIFB1Q8TDL5 484 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 THOC3Q96J01 351 aaKnown RBP4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 HS6ST2Q96MM7 605 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 FAM234AQ9H0X4 552 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 PIH1D1Q9NWS0 290 aaKnown RBP4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 ZSCAN32Q9NX65 697 aa4.03□□□□□ -1.76
HMGB1P31-201ENST00000437242 A0A087WWL8 130 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms