RNA–Protein interactions for RNA: ENST00000437103.1

TOP3B-207, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-207ENST00000437103 BIN1O00499 593 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 FAM200BP0CF97 657 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 CCDC192P0DO97 292 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 TARSP26639 723 aaKnown RBP13.06□□□□□ -0.32
TOP3B-207ENST00000437103 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-207ENST00000437103 NBL1P41271 181 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 FMO5P49326 533 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 TUBP50607 506 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 CACNA2D1P54289 1103 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 SLC8A3P57103 927 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 NR1H3Q13133 447 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 RUNX3Q13761 415 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 CAMK4Q16566 473 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 ZNF528Q3MIS6 628 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 CCDC40Q4G0X9 1142 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 CBWD6Q4V339 395 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 CT47A1Q5JQC4 288 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-207ENST00000437103 CBWD3Q5JTY5 395 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 DGKKQ5KSL6 1271 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 CBWD5Q5RIA9 395 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 DDX42Q86XP3 938 aaKnown RBP eCLIP13.06□□□□□ -0.32
TOP3B-207ENST00000437103 ARL14EPQ8N8R7 260 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-207ENST00000437103 WHAMMQ8TF30 809 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 OSCP1Q8WVF1 389 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 TATDN2Q93075 761 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 ELMO3Q96BJ8 720 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 TMEM176AQ96HP8 235 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 HEXIM2Q96MH2 286 aaKnown RBP13.06□□□□□ -0.32
TOP3B-207ENST00000437103 SMOQ99835 787 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 SRRTQ9BXP5 876 aaKnown RBP13.06□□□□□ -0.32
TOP3B-207ENST00000437103 DUSP16Q9BY84 665 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 TRPC7Q9HCX4 862 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 KRT82Q9NSB4 513 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 CISHQ9NSE2 258 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 TMEM30AQ9NV96 361 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 CCL26Q9Y258 94 aa13.06□□□□□ -0.32
TOP3B-207ENST00000437103 C2orf78A6NCI8 922 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 SPECC1L-ADORA2AF8WAN1 911 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 SLC9A3R1O14745 358 aaPredicted RBP13.05□□□□□ -0.32
TOP3B-207ENST00000437103 LAMTOR5O43504 91 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 OLFM2O95897 454 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 OAS1P00973 400 aaKnown RBP13.05□□□□□ -0.32
TOP3B-207ENST00000437103 ZDHHC11BP0C7U3 371 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 SLC5A3P53794 718 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 MAP3K7CLP57077 242 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 CUL2Q13617 745 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 LRRC32Q14392 662 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 PPP2R5DQ14738 602 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 ZNF77Q15935 545 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 HECTD3Q5T447 861 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 ZNF276Q8N554 614 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 FBXO32Q969P5 355 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 SMG9Q9H0W8 520 aaKnown RBP13.05□□□□□ -0.32
TOP3B-207ENST00000437103 CLSTN2Q9H4D0 955 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 LMAN1LQ9HAT1 526 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 TLR8Q9NR97 1041 aaKnown RBP13.05□□□□□ -0.32
TOP3B-207ENST00000437103 DUS2Q9NX74 493 aaKnown RBP13.05□□□□□ -0.32
TOP3B-207ENST00000437103 GTSE1Q9NYZ3 720 aa13.05□□□□□ -0.32
TOP3B-207ENST00000437103 CHORDC1Q9UHD1 332 aaPredicted RBP13.05□□□□□ -0.32
TOP3B-207ENST00000437103 LRRN2O75325 713 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 ABL1P00519 1130 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 CHRNB1P11230 501 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 CCDC130P13994 396 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 CD58P19256 250 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 CTHP32929 405 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 PSEN1P49768 467 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 RAD23BP54727 409 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 KCNH2Q12809 1159 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 MTF1Q14872 753 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 ARHGAP17Q68EM7 881 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 ZC3H14Q6PJT7 736 aaKnown RBP13.04□□□□□ -0.32
TOP3B-207ENST00000437103 CLEC20AQ6ZU45 233 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 TRIM59Q8IWR1 403 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 CPA6Q8N4T0 437 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 ANKRD52Q8NB46 1076 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 SLC4A11Q8NBS3 891 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 EHBP1Q8NDI1 1231 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 ZMIZ2Q8NF64 920 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 SCAMP5Q8TAC9 235 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 SH3RF2Q8TEC5 729 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 ATP2A3Q93084 1043 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 JAKMIP2Q96AA8 810 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 ZFYVE19Q96K21 471 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 GBP4Q96PP9 640 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 TWNKQ96RR1 684 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 SLC22A12Q96S37 553 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 FAM126AQ9BYI3 521 aaPredicted RBP13.04□□□□□ -0.32
TOP3B-207ENST00000437103 RNF38Q9H0F5 515 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 CHRDQ9H2X0 955 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.04□□□□□ -0.322e-7■■■■■ 51.8
TOP3B-207ENST00000437103 SPATA6Q9NWH7 488 aaPredicted RBP13.04□□□□□ -0.32
TOP3B-207ENST00000437103 TBC1D14Q9P2M4 693 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 HMGXB4Q9UGU5 601 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 DACH1Q9UI36 760 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 CTNND2Q9UQB3 1225 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 SCML2Q9UQR0 700 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.04□□□□□ -0.32
TOP3B-207ENST00000437103 KMT2EQ8IZD2 1858 aa13.04□□□□□ -0.32
TOP3B-207ENST00000437103 E2F8A0AVK6 867 aa13.03□□□□□ -0.32
TOP3B-207ENST00000437103 LEFTY2O00292 366 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms