RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 PRPF39Q86UA1 669 aaKnown RBP16.42■□□□□ 0.22
PTPN13-204ENST00000436978 MMGT1Q8N4V1 131 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 SENP2Q9HC62 589 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 MYO1GB0I1T2 1018 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 ENO3P13929 434 aaPredicted RBP16.42■□□□□ 0.22
PTPN13-204ENST00000436978 DYNC1I2Q13409 638 aaKnown RBP16.42■□□□□ 0.22
PTPN13-204ENST00000436978 CCNI2Q6ZMN8 369 aaPredicted RBP16.42■□□□□ 0.22
PTPN13-204ENST00000436978 CARNMT1Q8N4J0 409 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 DTNAQ9Y4J8 743 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 ZW10O43264 779 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 GRK3P35626 688 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 ITGA9Q13797 1035 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 GLRA4Q5JXX5 417 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 ACOT1Q86TX2 421 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 TMEM176AQ96HP8 235 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 EIF3HO15372 352 aaKnown RBP eCLIP16.42■□□□□ 0.22
PTPN13-204ENST00000436978 SYNCRIPO60506 623 aaKnown RBP16.42■□□□□ 0.22
PTPN13-204ENST00000436978 BLOC1S5Q8TDH9 187 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 WNK4Q96J92 1243 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 DNAJC7Q99615 494 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 DENND5BQ6ZUT9 1274 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 NLRP9Q7RTR0 991 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 YY1P25490 414 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 TBC1D13Q9NVG8 400 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 RSPH10B2B2RC85 870 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 RSPH10BP0C881 870 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 PSMA3P25788 255 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 HNRNPH2P55795 449 aaKnown RBP16.42■□□□□ 0.22
PTPN13-204ENST00000436978 DAB2P98082 770 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 C3orf20Q8ND61 904 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 THAP2Q9H0W7 228 aa16.42■□□□□ 0.22
PTPN13-204ENST00000436978 APOA1P02647 267 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 FDPSP14324 419 aaKnown RBP16.41■□□□□ 0.22
PTPN13-204ENST00000436978 MZF1P28698 734 aaPredicted RBP16.41■□□□□ 0.22
PTPN13-204ENST00000436978 CARSP49589 748 aaKnown RBP16.41■□□□□ 0.22
PTPN13-204ENST00000436978 SLC13A5Q86YT5 568 aaPredicted RBP16.41■□□□□ 0.22
PTPN13-204ENST00000436978 LZTS3O60299 673 aaPredicted RBP16.41■□□□□ 0.22
PTPN13-204ENST00000436978 PMPCBO75439 489 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 FKBP9O95302 570 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 ACADMP11310 421 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 FKBP9P1Q75LS8 142 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 ZNF438Q7Z4V0 828 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 E2F7Q96AV8 911 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 FBXO28Q9NVF7 368 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 ADGRB2O60241 1585 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 RTN3O95197 1032 aaPredicted RBP16.41■□□□□ 0.22
PTPN13-204ENST00000436978 ZNF284Q2VY69 593 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 ZNF473Q8WTR7 871 aaKnown RBP16.41■□□□□ 0.22
PTPN13-204ENST00000436978 RMND5AQ9H871 391 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 DSG3P32926 999 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 CAMK2GQ13555 558 aaPredicted RBP16.41■□□□□ 0.22
PTPN13-204ENST00000436978 TJAP1Q5JTD0 557 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 C4orf33Q8N1A6 199 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 RIOX1Q9H6W3 641 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 GLRA3O75311 464 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 KLRC1P26715 233 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 TGM3Q08188 693 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 GRIK4Q16099 956 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 CNPY3Q9BT09 278 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 MRPL9Q9BYD2 267 aaKnown RBP16.41■□□□□ 0.22
PTPN13-204ENST00000436978 KIAA1683Q9H0B3 1180 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 ILKAPQ9H0C8 392 aaPredicted RBP16.41■□□□□ 0.22
PTPN13-204ENST00000436978 KLC4Q9NSK0 619 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 TMEM120BA0PK00 339 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 CKMP06732 381 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 CHI3L2Q15782 390 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 LONP2Q86WA8 852 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 BBS7Q8IWZ6 715 aa16.41■□□□□ 0.22
PTPN13-204ENST00000436978 SUGP1Q8IWZ8 645 aaKnown RBP16.41■□□□□ 0.22
PTPN13-204ENST00000436978 CLCN3P51790 818 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 MDH1BQ5I0G3 518 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 EXD1Q8NHP7 514 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 ATP8B4Q8TF62 1192 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 CYGBQ8WWM9 190 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 EME1Q96AY2 570 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 ZNF333Q96JL9 665 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 NR2C2P49116 596 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 MAPK7Q13164 816 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 ACER1Q8TDN7 264 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 OSCP1Q8WVF1 389 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 CLPBQ9H078 707 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 TRIM10Q9UDY6 481 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 MYO1CO00159 1063 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 MYO1HQ8N1T3 1032 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 SPASTQ9UBP0 616 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 PDHXO00330 501 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 ALDH2P05091 517 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 ZNF720Q7Z2F6 126 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 C6orf203Q9P0P8 240 aaPredicted RBP16.4■□□□□ 0.22
PTPN13-204ENST00000436978 GPC2Q8N158 579 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 C9orf72Q96LT7 481 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 TUBGCP4Q9UGJ1 667 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 KAT6AQ92794 2004 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 A0A087WZ62 844 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 TRIM66O15016 1216 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 ACO1P21399 889 aaKnown RBP16.4■□□□□ 0.22
PTPN13-204ENST00000436978 FBXO47Q5MNV8 452 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 SMARCD1Q96GM5 515 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 BARX2Q9UMQ3 279 aaPredicted RBP16.4■□□□□ 0.22
PTPN13-204ENST00000436978 GUCA1CO95843 209 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms