RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 ZNF687Q8N1G0 1237 aa11.64□□□□□ -0.55
HMGCL-204ENST00000436439 ELMOD1Q8N336 334 aa11.64□□□□□ -0.55
HMGCL-204ENST00000436439 DCLK2Q8N568 766 aa11.64□□□□□ -0.55
HMGCL-204ENST00000436439 SUMF1Q8NBK3 374 aa11.64□□□□□ -0.55
HMGCL-204ENST00000436439 SHKBP1Q8TBC3 707 aa11.64□□□□□ -0.55
HMGCL-204ENST00000436439 SHC3Q92529 594 aa11.64□□□□□ -0.55
HMGCL-204ENST00000436439 CLDN23Q96B33 292 aa11.64□□□□□ -0.55
HMGCL-204ENST00000436439 ZNF512Q96ME7 567 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-204ENST00000436439 GPR88Q9GZN0 384 aa11.64□□□□□ -0.55
HMGCL-204ENST00000436439 XYLT2Q9H1B5 865 aa11.64□□□□□ -0.55
HMGCL-204ENST00000436439 FAM124BQ9H5Z6 455 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-204ENST00000436439 UBE2TQ9NPD8 197 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-204ENST00000436439 TRMT1Q9NXH9 659 aaKnown RBP11.64□□□□□ -0.55
HMGCL-204ENST00000436439 SIX4Q9UIU6 781 aa11.64□□□□□ -0.55
HMGCL-204ENST00000436439 AJAP1Q9UKB5 411 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-204ENST00000436439 BZW2Q9Y6E2 419 aaKnown RBP11.64□□□□□ -0.55
HMGCL-204ENST00000436439 RIF1Q5UIP0 2472 aaKnown RBP11.64□□□□□ -0.55
HMGCL-204ENST00000436439 MTMR11A4FU01 709 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 SOAT2O75908 522 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 SERPING1P05155 500 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 CCDC172P0C7W6 258 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 FERP16591 822 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 SOX5P35711 763 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 STAT1P42224 750 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 CDR1P51861 262 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 LILRA4P59901 499 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 NOP14P78316 857 aaKnown RBP11.63□□□□□ -0.55
HMGCL-204ENST00000436439 CSTF1Q05048 431 aaKnown RBP11.63□□□□□ -0.55
HMGCL-204ENST00000436439 DUSP4Q13115 394 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 GPR17Q13304 367 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 TRPC3Q13507 836 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 RAPGEF1Q13905 1077 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 STXBP5Q5T5C0 1151 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 HGSNATQ68CP4 663 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 GJB7Q6PEY0 223 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 ZC3H14Q6PJT7 736 aaKnown RBP11.63□□□□□ -0.55
HMGCL-204ENST00000436439 TSSK4Q6SA08 328 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 ZNF852Q6ZMS4 543 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 IRF2BP2Q7Z5L9 587 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 KIAA2013Q8IYS2 634 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 PPM1KQ8N3J5 372 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 KIF18AQ8NI77 898 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 ZSCAN18Q8TBC5 510 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-204ENST00000436439 DNASE1L2Q92874 299 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 SMARCD2Q92925 531 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 RSPRY1Q96DX4 576 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 KREMEN1Q96MU8 473 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 TRMT61BQ9BVS5 477 aaKnown RBP11.63□□□□□ -0.55
HMGCL-204ENST00000436439 BRD9Q9H8M2 597 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 ZNF334Q9HCZ1 680 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-204ENST00000436439 ASAH2Q9NR71 780 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 DPP3Q9NY33 737 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 FBXO4Q9UKT5 387 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 MAFFQ9ULX9 164 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 NDRG2Q9UN36 371 aaKnown RBP11.63□□□□□ -0.55
HMGCL-204ENST00000436439 SLC27A5Q9Y2P5 690 aa11.63□□□□□ -0.55
HMGCL-204ENST00000436439 SPTBN4Q9H254 2564 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 A0A1W2PRU2 124 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 ANO9A1A5B4 782 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 RIOK3O14730 519 aaKnown RBP11.62□□□□□ -0.55
HMGCL-204ENST00000436439 ITGB3P05106 788 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 PSMC3P17980 439 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 ANXA13P27216 316 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 GDI1P31150 447 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 RPS9P46781 194 aaKnown RBP11.62□□□□□ -0.55
HMGCL-204ENST00000436439 MYL6P60660 151 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 RBP5P82980 135 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 ASIC2Q16515 512 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 ZNF528Q3MIS6 628 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 C9orf57Q5W0N0 161 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 OVOS1Q6IE37 1185 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 GPIHBP1Q8IV16 184 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 FAM71AQ8IYT1 594 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 LRRC52Q8N7C0 313 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 ATAD1Q8NBU5 361 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 OR10T2Q8NGX3 314 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 TATDN2Q93075 761 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 RMDN1Q96DB5 314 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 FAM84AQ96KN4 292 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 SENP8Q96LD8 212 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 CHP1Q99653 195 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 PI4K2AQ9BTU6 479 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 TRPV4Q9HBA0 871 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 APOBEC3GQ9HC16 384 aaKnown RBP11.62□□□□□ -0.55
HMGCL-204ENST00000436439 ARHGAP20Q9P2F6 1191 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 CNTN6Q9UQ52 1028 aa11.62□□□□□ -0.55
HMGCL-204ENST00000436439 ZNF638Q14966 1978 aaKnown RBP11.61□□□□□ -0.55
HMGCL-204ENST00000436439 SOWAHDA6NJG2 315 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 OR6C75A6NL08 312 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 HEPACAM2A8MVW5 462 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 ARNTLO00327 626 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 FOXN3O00409 490 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-204ENST00000436439 PIRO00625 290 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 LCA5LO95447 670 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 TYMPP19971 482 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 MAGEA9P43362 315 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 MTAPQ13126 283 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 CUL2Q13617 745 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 ASTE1Q2TB18 679 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-204ENST00000436439 ZNF699Q32M78 642 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms