RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 SLITRK1Q96PX8 696 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 SMOQ99835 787 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 NT5C1AQ9BXI3 368 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 ARMCX3Q9UH62 379 aaPredicted RBP19.42■□□□□ 0.7
HMGN1-207ENST00000436324 CHORDC1Q9UHD1 332 aaPredicted RBP19.42■□□□□ 0.7
HMGN1-207ENST00000436324 CTNND2Q9UQB3 1225 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 MIA3Q5JRA6 1907 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 WDFY4Q6ZS81 3184 aa19.42■□□□□ 0.7
HMGN1-207ENST00000436324 OTOL1A6NHN0 477 aaPredicted RBP19.41■□□□□ 0.7
HMGN1-207ENST00000436324 PPP1R3GB7ZBB8 358 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 PROB1E7EW31 1015 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 RTN3O95197 1032 aaPredicted RBP19.41■□□□□ 0.7
HMGN1-207ENST00000436324 CHRNB1P11230 501 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 SLC5A3P53794 718 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 MCCD1P59942 119 aaPredicted RBP19.41■□□□□ 0.7
HMGN1-207ENST00000436324 INCA1Q0VD86 236 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 MORC3Q14149 939 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 ZNF394Q53GI3 561 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 WDR44Q5JSH3 913 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 TSSK4Q6SA08 328 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 ASCL5Q7RTU5 278 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 WHAMMQ8TF30 809 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 NELFBQ8WX92 580 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 MSANTD3Q96H12 275 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 RNF38Q9H0F5 515 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 DUS2Q9NX74 493 aaKnown RBP19.41■□□□□ 0.7
HMGN1-207ENST00000436324 SMPD4Q9NXE4 827 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 WNT6Q9Y6F9 365 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 OBSL1O75147 1896 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 PTPRDP23468 1912 aa19.41■□□□□ 0.7
HMGN1-207ENST00000436324 CILPO75339 1184 aa19.4■□□□□ 0.7
HMGN1-207ENST00000436324 TRIM21P19474 475 aaKnown RBP19.4■□□□□ 0.7
HMGN1-207ENST00000436324 ANP32AP39687 249 aaKnown RBP19.4■□□□□ 0.7
HMGN1-207ENST00000436324 PPP3CCP48454 512 aa19.4■□□□□ 0.7
HMGN1-207ENST00000436324 IFNAR2P48551 515 aa19.4■□□□□ 0.7
HMGN1-207ENST00000436324 PDE6CP51160 858 aa19.4■□□□□ 0.7
HMGN1-207ENST00000436324 STX17P56962 302 aa19.4■□□□□ 0.7
HMGN1-207ENST00000436324 UBE2HP62256 183 aa19.4■□□□□ 0.7
HMGN1-207ENST00000436324 USP4Q13107 963 aa19.4■□□□□ 0.7
HMGN1-207ENST00000436324 CAMK4Q16566 473 aa19.4■□□□□ 0.7
HMGN1-207ENST00000436324 CCDC40Q4G0X9 1142 aa19.4■□□□□ 0.7
HMGN1-207ENST00000436324 ZMIZ2Q8NF64 920 aa19.4■□□□□ 0.7
HMGN1-207ENST00000436324 NKD2Q969F2 451 aaPredicted RBP19.4■□□□□ 0.7
HMGN1-207ENST00000436324 CYFIP2Q96F07 1278 aa19.4■□□□□ 0.7
HMGN1-207ENST00000436324 DUSP9Q99956 384 aaKnown RBP19.4■□□□□ 0.7
HMGN1-207ENST00000436324 CHRDQ9H2X0 955 aa19.4■□□□□ 0.7
HMGN1-207ENST00000436324 ARHGAP26Q9UNA1 814 aa19.4■□□□□ 0.7
HMGN1-207ENST00000436324 DENND4CQ5VZ89 1909 aa19.4■□□□□ 0.7
HMGN1-207ENST00000436324 F5P12259 2224 aa19.4■□□□□ 0.7
HMGN1-207ENST00000436324 LEFTY2O00292 366 aa19.39■□□□□ 0.69
HMGN1-207ENST00000436324 TNFRSF10BO14763 440 aa19.39■□□□□ 0.69
HMGN1-207ENST00000436324 FAM200BP0CF97 657 aa19.39■□□□□ 0.69
HMGN1-207ENST00000436324 PPP1R2P41236 205 aa19.39■□□□□ 0.69
HMGN1-207ENST00000436324 ZXDBP98169 803 aa19.39■□□□□ 0.69
HMGN1-207ENST00000436324 PDGFRLQ15198 375 aa19.39■□□□□ 0.69
HMGN1-207ENST00000436324 C1orf228Q6PIY5 440 aa19.39■□□□□ 0.69
HMGN1-207ENST00000436324 OSCP1Q8WVF1 389 aa19.39■□□□□ 0.69
HMGN1-207ENST00000436324 HEXIM2Q96MH2 286 aaKnown RBP19.39■□□□□ 0.69
HMGN1-207ENST00000436324 HNRNPABQ99729 332 aaKnown RBP19.39■□□□□ 0.69
HMGN1-207ENST00000436324 ARID3AQ99856 593 aa19.39■□□□□ 0.69
HMGN1-207ENST00000436324 LINC00597Q9H2U6 94 aa19.39■□□□□ 0.69
HMGN1-207ENST00000436324 GMIPQ9P107 970 aa19.39■□□□□ 0.69
HMGN1-207ENST00000436324 FBXO4Q9UKT5 387 aa19.39■□□□□ 0.69
HMGN1-207ENST00000436324 CPQQ9Y646 472 aa19.39■□□□□ 0.69
HMGN1-207ENST00000436324 PRR23AA6NEV1 266 aa19.38■□□□□ 0.69
HMGN1-207ENST00000436324 SCAMP3O14828 347 aaKnown RBP19.38■□□□□ 0.69
HMGN1-207ENST00000436324 MBL2P11226 248 aaPredicted RBP19.38■□□□□ 0.69
HMGN1-207ENST00000436324 LRMPQ12912 555 aa19.38■□□□□ 0.69
HMGN1-207ENST00000436324 LRRC32Q14392 662 aa19.38■□□□□ 0.69
HMGN1-207ENST00000436324 ZNF638Q14966 1978 aaKnown RBP19.38■□□□□ 0.69
HMGN1-207ENST00000436324 GREB1Q4ZG55 1949 aa19.38■□□□□ 0.69
HMGN1-207ENST00000436324 TTI2Q6NXR4 508 aa19.38■□□□□ 0.69
HMGN1-207ENST00000436324 FILIP1Q7Z7B0 1213 aa19.38■□□□□ 0.69
HMGN1-207ENST00000436324 CPA6Q8N4T0 437 aa19.38■□□□□ 0.69
HMGN1-207ENST00000436324 PDZD8Q8NEN9 1154 aa19.38■□□□□ 0.69
HMGN1-207ENST00000436324 SLC35C1Q96A29 364 aa19.38■□□□□ 0.69
HMGN1-207ENST00000436324 CEP63Q96MT8 703 aa19.38■□□□□ 0.69
HMGN1-207ENST00000436324 ECT2Q9H8V3 914 aa19.38■□□□□ 0.69
HMGN1-207ENST00000436324 METTL14Q9HCE5 456 aaKnown RBP19.38■□□□□ 0.69
HMGN1-207ENST00000436324 CISHQ9NSE2 258 aa19.38■□□□□ 0.69
HMGN1-207ENST00000436324 OAS1P00973 400 aaKnown RBP19.37■□□□□ 0.69
HMGN1-207ENST00000436324 PFKLP17858 780 aa19.37■□□□□ 0.69
HMGN1-207ENST00000436324 SLC7A9P82251 487 aa19.37■□□□□ 0.69
HMGN1-207ENST00000436324 GAS6Q14393 721 aa19.37■□□□□ 0.69
HMGN1-207ENST00000436324 EML3Q32P44 896 aa19.37■□□□□ 0.69
HMGN1-207ENST00000436324 PPP1R26Q5T8A7 1209 aaPredicted RBP19.37■□□□□ 0.69
HMGN1-207ENST00000436324 NAIF1Q69YI7 327 aaPredicted RBP19.37■□□□□ 0.69
HMGN1-207ENST00000436324 Q6ZS52 159 aa19.37■□□□□ 0.69
HMGN1-207ENST00000436324 CLEC20AQ6ZU45 233 aa19.37■□□□□ 0.69
HMGN1-207ENST00000436324 GPRIN1Q7Z2K8 1008 aa19.37■□□□□ 0.69
HMGN1-207ENST00000436324 DNAI2Q9GZS0 605 aa19.37■□□□□ 0.69
HMGN1-207ENST00000436324 CSNK1G1Q9HCP0 422 aa19.37■□□□□ 0.69
HMGN1-207ENST00000436324 IL37Q9NZH6 218 aa19.37■□□□□ 0.69
HMGN1-207ENST00000436324 CACNA1IQ9P0X4 2223 aa19.37■□□□□ 0.69
HMGN1-207ENST00000436324 ANAPC1Q9H1A4 1944 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 BICDL2A1A5D9 508 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 COCHO43405 550 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 FMO5P49326 533 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 PGFP49763 221 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 SATB1Q01826 763 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms