RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 HHIPQ96QV1 700 aa8.28□□□□□ -1.08
VPS50-203ENST00000436177 SPSB2Q99619 263 aa8.28□□□□□ -1.08
VPS50-203ENST00000436177 FGFBP2Q9BYJ0 223 aa8.28□□□□□ -1.08
VPS50-203ENST00000436177 ELOVL4Q9GZR5 314 aa8.28□□□□□ -1.08
VPS50-203ENST00000436177 ARRDC1-AS1Q9H2J1 176 aa8.28□□□□□ -1.08
VPS50-203ENST00000436177 MAGEF1Q9HAY2 307 aa8.28□□□□□ -1.08
VPS50-203ENST00000436177 SIX4Q9UIU6 781 aa8.28□□□□□ -1.08
VPS50-203ENST00000436177 MTMR6Q9Y217 621 aa8.28□□□□□ -1.08
VPS50-203ENST00000436177 MORC2Q9Y6X9 1032 aaPredicted RBP8.28□□□□□ -1.08
VPS50-203ENST00000436177 UBE4BO95155 1302 aa8.28□□□□□ -1.08
VPS50-203ENST00000436177 SDK1Q7Z5N4 2213 aa8.27□□□□□ -1.08
VPS50-203ENST00000436177 TSC2P49815 1807 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 COL4A2P08572 1712 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 A0A087X0B3 334 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 C2orf78A6NCI8 922 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 K7ELQ4 463 aaPredicted RBP8.27□□□□□ -1.09
VPS50-203ENST00000436177 GABRDO14764 452 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 ATP2C2O75185 946 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 TADA3O75528 432 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 RHOBTB1O94844 696 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 EPN2O95208 641 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 ADH1CP00326 375 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 PFKLP17858 780 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 TGM1P22735 817 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 WARSP23381 471 aaKnown RBP8.27□□□□□ -1.09
VPS50-203ENST00000436177 GJA4P35212 333 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 GNL1P36915 607 aaPredicted RBP8.27□□□□□ -1.09
VPS50-203ENST00000436177 MPLP40238 635 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 ME1P48163 572 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 PPP3CCP48454 512 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 NASPP49321 788 aaPredicted RBP8.27□□□□□ -1.09
VPS50-203ENST00000436177 GALK1P51570 392 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 SNRPFP62306 86 aaKnown RBP8.27□□□□□ -1.09
VPS50-203ENST00000436177 IFRD2Q12894 506 aaPredicted RBP8.27□□□□□ -1.09
VPS50-203ENST00000436177 DMC1Q14565 340 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 ZNF77Q15935 545 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 CCDC142Q17RM4 750 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 WDR72Q3MJ13 1102 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 TDRD10Q5VZ19 366 aaKnown RBP8.27□□□□□ -1.09
VPS50-203ENST00000436177 PKN3Q6P5Z2 889 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 TRAPPC11Q7Z392 1133 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 KBTBD6Q86V97 674 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 TTC30AQ86WT1 665 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 NELFCDQ8IXH7 590 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 XXYLT1Q8NBI6 393 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 RDH13Q8NBN7 331 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 OR5B17Q8NGF7 314 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 GOLGA5Q8TBA6 731 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 MYCBPAPQ8TBZ2 947 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 CHFRQ96EP1 664 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 CHAMP1Q96JM3 812 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 SPATA17Q96L03 361 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 CYP2S1Q96SQ9 504 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 CGRRF1Q99675 332 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 TRIM9Q9C026 710 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 NACA2Q9H009 215 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 VPS45Q9NRW7 570 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 AGPAT3Q9NRZ7 376 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 C2orf42Q9NWW7 574 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 FAM13BQ9NYF5 915 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 ARHGAP26Q9UNA1 814 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 PCDHGA5Q9Y5G8 931 aa8.27□□□□□ -1.09
VPS50-203ENST00000436177 OTOL1A6NHN0 477 aaPredicted RBP8.26□□□□□ -1.09
VPS50-203ENST00000436177 A8MXQ7 604 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 F8VP50 259 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 HCRTO43612 131 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 EXOC3O60645 756 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 CUTAO60888 179 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 PPP6R2O75170 966 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 ALDH1A2O94788 518 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 YEATS4O95619 227 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 ZNF806P0C7X5 589 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 P4HA1P13674 534 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 DGKEP52429 567 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 CREB5Q02930 508 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 PSMD6Q15008 389 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 SF3A2Q15428 464 aaKnown RBP8.26□□□□□ -1.09
VPS50-203ENST00000436177 CCDC6Q16204 474 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 ZNF699Q32M78 642 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 EML3Q32P44 896 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 USP39Q53GS9 565 aaKnown RBP8.26□□□□□ -1.09
VPS50-203ENST00000436177 WDR44Q5JSH3 913 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 FOXD4L5Q5VV16 416 aaPredicted RBP8.26□□□□□ -1.09
VPS50-203ENST00000436177 ANO7Q6IWH7 933 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 FAM171BQ6P995 826 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 SYT13Q7L8C5 426 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 METTL3Q86U44 580 aaKnown RBP8.26□□□□□ -1.09
VPS50-203ENST00000436177 HSCBQ8IWL3 235 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 CEP57L1Q8IYX8 460 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 LINC00301Q8NCQ3 95 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 PDZD8Q8NEN9 1154 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 KBTBD7Q8WVZ9 684 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 FOXD4L4Q8WXT5 416 aaPredicted RBP8.26□□□□□ -1.09
VPS50-203ENST00000436177 HPS3Q969F9 1004 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 SYAP1Q96A49 352 aaPredicted RBP8.26□□□□□ -1.09
VPS50-203ENST00000436177 PCED1BQ96HM7 432 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 TNIP3Q96KP6 325 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 SPACA7Q96KW9 195 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 CNTNAP3BQ96NU0 1288 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 SLC22A12Q96S37 553 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms