RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 LOXL4Q96JB6 756 aa5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 PYM1Q9BRP8 204 aaKnown RBP5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 NUDT22Q9BRQ3 303 aa5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 RTKNQ9BST9 563 aa5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 TP63Q9H3D4 680 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 SMOC2Q9H3U7 446 aa5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 PRDM16Q9HAZ2 1276 aa5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 GBA2Q9HCG7 927 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 AKIP1Q9NQ31 210 aa5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 TMEM74BQ9NUR3 256 aa5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 MRPS18AQ9NVS2 196 aaKnown RBP5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 IGSF9Q9P2J2 1179 aa5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 CNOT11Q9UKZ1 510 aaKnown RBP5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 GPR52Q9Y2T5 361 aa5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 CHST2Q9Y4C5 530 aa5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 DTNAQ9Y4J8 743 aa5.23□□□□□ -1.57
HMGB1P45-201ENST00000435986 A0A087WZ62 844 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 PNMA6EA0A0J9YXQ4 647 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 hCG_1984214I3L0E3 225 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 ITGB3P05106 788 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 XBP1P17861 261 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 MST1P26927 711 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 BMPR1AP36894 532 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 AARSP49588 968 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 GATMP50440 423 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 TOB1P50616 345 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 ITIH3Q06033 890 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 CSHL1Q14406 222 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 FBXO47Q5MNV8 452 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 TMTC4Q5T4D3 741 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 JAKMIP3Q5VZ66 844 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 RINT1Q6NUQ1 792 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 Q6ZSN1 163 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 KCTD20Q7Z5Y7 419 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 FSTL5Q8N475 847 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 OTUD7AQ8TE49 926 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 SDCCAG3Q96C92 435 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 NEU1Q99519 415 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 EIF3CQ99613 913 aaKnown RBP5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 BRD8Q9H0E9 1235 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 CXorf36Q9H7Y0 433 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 TRIM36Q9NQ86 728 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 TBCCD1Q9NVR7 557 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 RRN3Q9NYV6 651 aa5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 NKX1-2Q9UD57 310 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 MRPS17Q9Y2R5 130 aaKnown RBP5.22□□□□□ -1.57
HMGB1P45-201ENST00000435986 OR2W5A6NFC9 320 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 TNFRSF6BO95407 300 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 PECAM1P16284 738 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 LAG3P18627 525 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 DDX6P26196 483 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 CST5P28325 142 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 RBL1P28749 1068 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 ZEB1P37275 1124 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 VAV2P52735 878 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 CTSWP56202 376 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 NXPH1P58417 271 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 RESTQ13127 1097 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 EFR3AQ14156 821 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 CLCA4Q14CN2 919 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 RPS6KA2Q15349 733 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 TAF5Q15542 800 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 CYP2A13Q16696 494 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 SULT6B1Q6IMI4 303 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 TMPRSS9Q7Z410 1059 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 TMPRSS6Q8IU80 811 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 SLC44A2Q8IWA5 706 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 FTSJ3Q8IY81 847 aaKnown RBP5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 TTC9BQ8N6N2 239 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 NAXEQ8NCW5 288 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 OR6Y1Q8NGX8 325 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 SPPL3Q8TCT6 385 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 CPT1BQ92523 772 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 LRIG1Q96JA1 1093 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 VPS50Q96JG6 964 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 UBXN10Q96LJ8 280 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 SERHL2Q9H4I8 314 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 GLOD4Q9HC38 313 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 ITM2CQ9NQX7 267 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 STEAP1Q9UHE8 339 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 SERTAD3Q9UJW9 196 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 HS3ST4Q9Y661 456 aa5.21□□□□□ -1.58
HMGB1P45-201ENST00000435986 K7ESM1 405 aa5.2□□□□□ -1.58
HMGB1P45-201ENST00000435986 EIF3FO00303 357 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P45-201ENST00000435986 IPO5O00410 1097 aaKnown RBP5.2□□□□□ -1.58
HMGB1P45-201ENST00000435986 MUSKO15146 869 aa5.2□□□□□ -1.58
HMGB1P45-201ENST00000435986 NCAM2O15394 837 aa5.2□□□□□ -1.58
HMGB1P45-201ENST00000435986 SLC16A3O15427 465 aaKnown RBP5.2□□□□□ -1.58
HMGB1P45-201ENST00000435986 NCR1O76036 304 aa5.2□□□□□ -1.58
HMGB1P45-201ENST00000435986 ONECUT2O95948 504 aa5.2□□□□□ -1.58
HMGB1P45-201ENST00000435986 ANXA6P08133 673 aa5.2□□□□□ -1.58
HMGB1P45-201ENST00000435986 AKT1P31749 480 aa5.2□□□□□ -1.58
HMGB1P45-201ENST00000435986 UQCRC1P31930 480 aa5.2□□□□□ -1.58
HMGB1P45-201ENST00000435986 MCM2P49736 904 aa5.2□□□□□ -1.58
HMGB1P45-201ENST00000435986 MC2RQ01718 297 aa5.2□□□□□ -1.58
HMGB1P45-201ENST00000435986 SCAPQ12770 1279 aa5.2□□□□□ -1.58
HMGB1P45-201ENST00000435986 ST3GAL2Q16842 350 aa5.2□□□□□ -1.58
HMGB1P45-201ENST00000435986 GEN1Q17RS7 908 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms