RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 LRP6O75581 1613 aa8.2□□□□□ -1.1
PTPRK-212ENST00000434424 MAP3K1Q13233 1512 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 CCDC196A0A1B0GTZ2 297 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 ANKRD18BA2A2Z9 1011 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 CCP110O43303 1012 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 COQ9O75208 318 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 CYP2C9P11712 490 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 PECAM1P16284 738 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-212ENST00000434424 IGFBP6P24592 240 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-212ENST00000434424 ATICP31939 592 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 ADCY7P51828 1080 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 CDR1P51861 262 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 PNLIPRP1P54315 467 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 PRKAA2P54646 552 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 EPHB3P54753 998 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 KRTAP10-2P60368 255 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 ACTR2P61160 394 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 NSUN2Q08J23 767 aaKnown RBP eCLIP8.19□□□□□ -1.1
PTPRK-212ENST00000434424 DUSP8Q13202 625 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 SLC12A1Q13621 1099 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 INSCQ1MX18 579 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 FAM26FQ5R3K3 315 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 GPATCH4Q5T3I0 446 aaKnown RBP8.19□□□□□ -1.1
PTPRK-212ENST00000434424 ATPAF1Q5TC12 328 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-212ENST00000434424 FAXCQ5TGI0 409 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 CCDC30Q5VVM6 783 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 SPATA1Q5VX52 437 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 FAM160B1Q5W0V3 765 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 ITPRIPL1Q6GPH6 555 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 MRNIPQ6NTE8 343 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 Q6ZUG5 572 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 TSPYL6Q8N831 410 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 FAM46DQ8NEK8 389 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 DNERQ8NFT8 737 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 OR1N1Q8NGS0 311 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 OR6Y1Q8NGX8 325 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 MZB1Q8WU39 189 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 CENPIQ92674 756 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-212ENST00000434424 DACT3Q96B18 629 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-212ENST00000434424 SDCCAG3Q96C92 435 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 HVCN1Q96D96 273 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 RPL10LQ96L21 214 aaKnown RBP8.19□□□□□ -1.1
PTPRK-212ENST00000434424 COG8Q96MW5 612 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 RBM15Q96T37 977 aaKnown RBP eCLIP8.19□□□□□ -1.1
PTPRK-212ENST00000434424 XPNPEP3Q9NQH7 507 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 PRDM8Q9NQV8 689 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 OLA1Q9NTK5 396 aaKnown RBP8.19□□□□□ -1.1
PTPRK-212ENST00000434424 TRPC5Q9UL62 973 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-212ENST00000434424 TBC1D30Q9Y2I9 924 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 DTNAQ9Y4J8 743 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 ADAMTS20P59510 1910 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 EFCAB6Q5THR3 1501 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 EHBP1L1Q8N3D4 1523 aa8.19□□□□□ -1.1
PTPRK-212ENST00000434424 H7C4K7 107 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 CCER2I3L3R5 266 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 RFXAPO00287 272 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 PJA2O43164 708 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 POMCP01189 267 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 JUPP14923 745 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 ZNF28P17035 718 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 ALDH18A1P54886 795 aaKnown RBP8.18□□□□□ -1.1
PTPRK-212ENST00000434424 NR1H2P55055 460 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 NFIXQ14938 502 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 ACAP1Q15027 740 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 SURF1Q15526 300 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 PRR31Q5SQ13 230 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 AGAP9Q5VTM2 703 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 USP30Q70CQ3 517 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 SCAMP5Q8TAC9 235 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 SLC35B2Q8TB61 432 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 UCMAQ8WVF2 138 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 RRP36Q96EU6 259 aaKnown RBP8.18□□□□□ -1.1
PTPRK-212ENST00000434424 AJUBAQ96IF1 538 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 MOGAT1Q96PD6 335 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 BARD1Q99728 777 aaKnown RBP8.18□□□□□ -1.1
PTPRK-212ENST00000434424 ENKD1Q9H0I2 346 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 TP63Q9H3D4 680 aaPredicted RBP8.18□□□□□ -1.1
PTPRK-212ENST00000434424 GSTO2Q9H4Y5 243 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 ZBTB26Q9HCK0 441 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 PREBQ9HCU5 417 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 LPAR3Q9UBY5 353 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 RGS12O14924 1447 aa8.18□□□□□ -1.1
PTPRK-212ENST00000434424 ZC3H13Q5T200 1668 aaKnown RBP8.18□□□□□ -1.1
PTPRK-212ENST00000434424 STRCP1A6NGW2 1772 aa8.17□□□□□ -1.1
PTPRK-212ENST00000434424 DNPH1O43598 174 aa8.17□□□□□ -1.1
PTPRK-212ENST00000434424 GFPT2O94808 682 aa8.17□□□□□ -1.1
PTPRK-212ENST00000434424 RXRAP19793 462 aa8.17□□□□□ -1.1
PTPRK-212ENST00000434424 VIPR2P41587 438 aa8.17□□□□□ -1.1
PTPRK-212ENST00000434424 BCAT1P54687 386 aa8.17□□□□□ -1.1
PTPRK-212ENST00000434424 NAP1L1P55209 391 aaKnown RBP8.17□□□□□ -1.1
PTPRK-212ENST00000434424 NPEPPSP55786 919 aa8.17□□□□□ -1.1
PTPRK-212ENST00000434424 CLRN1P58418 232 aa8.17□□□□□ -1.1
PTPRK-212ENST00000434424 RAP2BP61225 183 aa8.17□□□□□ -1.1
PTPRK-212ENST00000434424 POU5F1Q01860 360 aaKnown RBP8.17□□□□□ -1.1
PTPRK-212ENST00000434424 SCAPQ12770 1279 aa8.17□□□□□ -1.1
PTPRK-212ENST00000434424 MRPL49Q13405 166 aaKnown RBP8.17□□□□□ -1.1
PTPRK-212ENST00000434424 FCRL6Q6DN72 434 aa8.17□□□□□ -1.1
PTPRK-212ENST00000434424 BRINP3Q76B58 766 aa8.17□□□□□ -1.1
PTPRK-212ENST00000434424 FASTKD5Q7L8L6 764 aaKnown RBP8.17□□□□□ -1.1
PTPRK-212ENST00000434424 TCP11L2Q8N4U5 519 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms