RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 ABHD8Q96I13 439 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 CFAP57Q96MR6 1250 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 PITPNM3Q9BZ71 974 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 CCDC134Q9H6E4 229 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 HEY1Q9Y5J3 304 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 A0A0J9YVX5 310 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 TOM1L1O75674 476 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 CALB1P05937 261 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 ITGA2BP08514 1039 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 ACADSP16219 412 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 RPS12P25398 132 aaKnown RBP12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 RFC1P35251 1148 aaPredicted RBP12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 CDH8P55286 799 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 DNAJC3Q13217 504 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 FAM13CQ8NE31 585 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 TRPM4Q8TD43 1214 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 SPOCK2Q92563 424 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 KLRG1Q96E93 195 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 SPATA16Q9BXB7 569 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 MRPL4Q9BYD3 311 aaKnown RBP12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 AFG3L2Q9Y4W6 797 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 NOP56O00567 594 aaKnown RBP12.77□□□□□ -0.36
SEMA3F-206ENST00000434342 CCNG1P51959 295 aa12.77□□□□□ -0.36
SEMA3F-206ENST00000434342 MAPK6Q16659 721 aa12.77□□□□□ -0.36
SEMA3F-206ENST00000434342 TREML2Q5T2D2 321 aa12.77□□□□□ -0.36
SEMA3F-206ENST00000434342 SNX30Q5VWJ9 437 aa12.77□□□□□ -0.36
SEMA3F-206ENST00000434342 BRSK2Q8IWQ3 736 aa12.77□□□□□ -0.36
SEMA3F-206ENST00000434342 ZCCHC9Q8N567 271 aaKnown RBP12.77□□□□□ -0.36
SEMA3F-206ENST00000434342 NIF3L1Q9GZT8 377 aa12.77□□□□□ -0.36
SEMA3F-206ENST00000434342 TUT1Q9H6E5 874 aaKnown RBP12.77□□□□□ -0.36
SEMA3F-206ENST00000434342 KLHL14Q9P2G3 628 aa12.77□□□□□ -0.36
SEMA3F-206ENST00000434342 ADAMTS5Q9UNA0 930 aa12.77□□□□□ -0.36
SEMA3F-206ENST00000434342 POLIQ9UNA4 740 aa12.77□□□□□ -0.36
SEMA3F-206ENST00000434342 SH3GLB1Q9Y371 365 aa12.77□□□□□ -0.36
SEMA3F-206ENST00000434342 SLC4A7Q9Y6M7 1214 aa12.77□□□□□ -0.36
SEMA3F-206ENST00000434342 ZNF646O15015 1829 aaPredicted RBP12.77□□□□□ -0.37
SEMA3F-206ENST00000434342 PIK3R2O00459 728 aa12.77□□□□□ -0.37
SEMA3F-206ENST00000434342 STAM2O75886 525 aa12.77□□□□□ -0.37
SEMA3F-206ENST00000434342 FARP2O94887 1054 aaPredicted RBP12.77□□□□□ -0.37
SEMA3F-206ENST00000434342 PRKCBP05771 671 aa12.77□□□□□ -0.37
SEMA3F-206ENST00000434342 PGK2P07205 417 aa12.77□□□□□ -0.37
SEMA3F-206ENST00000434342 SKIP12755 728 aa12.77□□□□□ -0.37
SEMA3F-206ENST00000434342 CCR3P51677 355 aa12.77□□□□□ -0.37
SEMA3F-206ENST00000434342 PKN2Q16513 984 aaKnown RBP12.77□□□□□ -0.37
SEMA3F-206ENST00000434342 WDR72Q3MJ13 1102 aa12.77□□□□□ -0.37
SEMA3F-206ENST00000434342 C6orf183Q5T699 404 aa12.77□□□□□ -0.37
SEMA3F-206ENST00000434342 TMEM53Q6P2H8 277 aa12.77□□□□□ -0.37
SEMA3F-206ENST00000434342 ABLIM1O14639 778 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 DNALI1O14645 258 aaPredicted RBP12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 OR6B1O95007 311 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 OXCT1P55809 520 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 IL9RQ01113 521 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 GAD2Q05329 585 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 LAMTOR4Q0VGL1 99 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 KCTD21Q4G0X4 260 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 TFDP3Q5H9I0 405 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 TMEM63BQ5T3F8 832 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 WDTC1Q8N5D0 677 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 SMYD1Q8NB12 490 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 SEPT1Q8WYJ6 367 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 R3HDMLQ9H3Y0 253 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 FAM47DPA6NHR8 397 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 ATP2A1O14983 1001 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 B4GALT5O43286 388 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 CST8O60676 142 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 KRT3P12035 628 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 CA4P22748 312 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 VARSP26640 1264 aaKnown RBP12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 FOXN2P32314 431 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 HSDL1Q3SXM5 330 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 FAM160B1Q5W0V3 765 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 GRAMD4Q6IC98 578 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 DENND1BQ6P3S1 775 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 TMCO5AQ8N6Q1 288 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 GBP7Q8N8V2 638 aaPredicted RBP12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 FAM136AQ96C01 138 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 HSFX1Q9UBD0 423 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 LRCH1Q9Y2L9 728 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 ARL2BPQ9Y2Y0 163 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 ADGRA2Q96PE1 1338 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 WDR91A4D1P6 747 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 PDLIM1O00151 329 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 MSCO60682 206 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 PENKP01210 267 aaPredicted RBP12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 PIGRP01833 764 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 NRLP54845 237 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 WDR4P57081 412 aaKnown RBP12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 PSMC1P62191 440 aaKnown RBP12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 GADL1Q6ZQY3 521 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 SPATA24Q86W54 205 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 ZBTB8OSQ8IWT0 167 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 JOSD2Q8TAC2 188 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 ACTL9Q8TC94 416 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 NIFKQ9BYG3 293 aaKnown RBP12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 TRABDQ9H4I3 376 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 PCDH18Q9HCL0 1135 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 SLCO1B3Q9NPD5 702 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 BTBD7Q9P203 1132 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 WDR37Q9Y2I8 494 aa12.76□□□□□ -0.37
SEMA3F-206ENST00000434342 TMA7Q9Y2S6 64 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms