RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 LRCH4O75427 683 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 CCDC130P13994 396 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 ASPAP45381 313 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 SH3GL3Q99963 347 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 TACO1Q9BSH4 297 aaKnown RBP11.92□□□□□ -0.5
CLDN4-202ENST00000431918 SLC13A1Q9BZW2 595 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 GOLGA2P5Q9HBQ8 144 aa11.92□□□□□ -0.5
CLDN4-202ENST00000431918 SAT1P21673 171 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 GNASQ5JWF2 1037 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 SH3PXD2AQ5TCZ1 1133 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 LGSNQ5TDP6 509 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 FAM183BPQ6ZVS7 135 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 PPIL6Q8IXY8 311 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 LPIN3Q9BQK8 851 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 NXF3Q9H4D5 531 aaKnown RBP11.91□□□□□ -0.5
CLDN4-202ENST00000431918 CYP3A43Q9HB55 503 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 FAM47DPA6NHR8 397 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 SKAP2O75563 359 aaPredicted RBP11.91□□□□□ -0.5
CLDN4-202ENST00000431918 PAEPP09466 180 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 AP1B1Q10567 949 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 ZNF268Q14587 947 aaPredicted RBP11.91□□□□□ -0.5
CLDN4-202ENST00000431918 KYAT1Q16773 422 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 PPME1Q9Y570 386 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 GREB1LQ9C091 1923 aaPredicted RBP11.91□□□□□ -0.5
CLDN4-202ENST00000431918 STRNO43815 780 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 MYCP01106 439 aaPredicted RBP11.91□□□□□ -0.5
CLDN4-202ENST00000431918 EDNRBP24530 442 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 MXRA7P84157 204 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 ARHGAP1Q07960 439 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 CYP1B1Q16678 543 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 HEATR6Q6AI08 1181 aaKnown RBP11.91□□□□□ -0.5
CLDN4-202ENST00000431918 SLC4A11Q8NBS3 891 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 KIF9Q9HAQ2 790 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 TUBGCP4Q9UGJ1 667 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 ITGA11Q9UKX5 1188 aa11.91□□□□□ -0.5
CLDN4-202ENST00000431918 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLDN4-202ENST00000431918 RRN3P2A6NIE6 340 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 TROVE2P10155 538 aaKnown RBP eCLIP11.9□□□□□ -0.5
CLDN4-202ENST00000431918 KRT4P19013 534 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 ATICP31939 592 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 SESN2P58004 480 aaPredicted RBP11.9□□□□□ -0.5
CLDN4-202ENST00000431918 RNASELQ05823 741 aaKnown RBP11.9□□□□□ -0.5
CLDN4-202ENST00000431918 PKN2Q16513 984 aaKnown RBP11.9□□□□□ -0.5
CLDN4-202ENST00000431918 PPP1R26Q5T8A7 1209 aaPredicted RBP11.9□□□□□ -0.5
CLDN4-202ENST00000431918 ZNF560Q96MR9 790 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 AGAP3Q96P47 875 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 MRPL45Q9BRJ2 306 aaKnown RBP11.9□□□□□ -0.5
CLDN4-202ENST00000431918 CEP41Q9BYV8 373 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 PCDH9Q9HC56 1237 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 PIH1D1Q9NWS0 290 aaKnown RBP11.9□□□□□ -0.5
CLDN4-202ENST00000431918 MRPL42Q9Y6G3 142 aaKnown RBP11.9□□□□□ -0.5
CLDN4-202ENST00000431918 A0A0G2JND7 137 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 SULT1E1P49888 294 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 ZC3H12AQ5D1E8 599 aaKnown RBP11.9□□□□□ -0.5
CLDN4-202ENST00000431918 SLC27A1Q6PCB7 646 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 SPATA21Q7Z572 469 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 TLK2Q86UE8 772 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 UNC45BQ8IWX7 931 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 DNAAF3Q8N9W5 541 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 CCDC110Q8TBZ0 833 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 EIF2AQ9BY44 585 aaKnown RBP11.9□□□□□ -0.5
CLDN4-202ENST00000431918 IGKV6D-21A0A0A0MT36 114 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 SMPD1P17405 629 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 COPS2P61201 443 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 MORF4L2Q15014 288 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 CNGA2Q16280 664 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 FBXO47Q5MNV8 452 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 ERMARDQ5T6L9 678 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 VPS52Q8N1B4 723 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 KAT2BQ92831 832 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 SDCBP2Q9H190 292 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 ACTR5Q9H9F9 607 aaPredicted RBP11.9□□□□□ -0.5
CLDN4-202ENST00000431918 SIX4Q9UIU6 781 aa11.9□□□□□ -0.5
CLDN4-202ENST00000431918 UBQLN1Q9UMX0 589 aaKnown RBP11.9□□□□□ -0.5
CLDN4-202ENST00000431918 HMGCRP04035 888 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 IQCF3P0C7M6 154 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 DCAF4L1Q3SXM0 396 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 ANKRD20A3Q5VUR7 823 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 KIF2BQ8N4N8 673 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 TTC39CQ8N584 583 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 ALLCQ8N6M5 410 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 PPTC7Q8NI37 304 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 GTF3C2Q8WUA4 911 aaPredicted RBP11.89□□□□□ -0.51
CLDN4-202ENST00000431918 PSMC3IPQ9P2W1 217 aaPredicted RBP11.89□□□□□ -0.51
CLDN4-202ENST00000431918 SLC12A6Q9UHW9 1150 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 USP15Q9Y4E8 981 aaPredicted RBP11.89□□□□□ -0.51
CLDN4-202ENST00000431918 CCDC195A0A1B0GUA6 201 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 CCDC78A2IDD5 438 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 CNMDO75829 334 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 IL1R2P27930 398 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 RPL22P35268 128 aaKnown RBP11.89□□□□□ -0.51
CLDN4-202ENST00000431918 ZNF200P98182 395 aaPredicted RBP11.89□□□□□ -0.51
CLDN4-202ENST00000431918 PDE1BQ01064 536 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 KLHL38Q2WGJ6 581 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 RSPH3Q86UC2 560 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 XYLT1Q86Y38 959 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 ZCCHC9Q8N567 271 aaKnown RBP11.89□□□□□ -0.51
CLDN4-202ENST00000431918 C12orf50Q8NA57 414 aaPredicted RBP11.89□□□□□ -0.51
CLDN4-202ENST00000431918 OLIG1Q8TAK6 271 aa11.89□□□□□ -0.51
CLDN4-202ENST00000431918 SLC2A14Q8TDB8 520 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms