RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 SFTPA1Q8IWL2 248 aa23.61■■□□□ 1.37
PTPRA-207ENST00000431048 HDDC3Q8N4P3 179 aa23.61■■□□□ 1.37
PTPRA-207ENST00000431048 KCNV2Q8TDN2 545 aa23.61■■□□□ 1.37
PTPRA-207ENST00000431048 ACCSQ96QU6 501 aa23.61■■□□□ 1.37
PTPRA-207ENST00000431048 KIF2CQ99661 725 aa23.61■■□□□ 1.37
PTPRA-207ENST00000431048 SYT15Q9BQS2 421 aa23.61■■□□□ 1.37
PTPRA-207ENST00000431048 RBAKQ9NYW8 714 aaPredicted RBP23.61■■□□□ 1.37
PTPRA-207ENST00000431048 BCCIPQ9P287 314 aaKnown RBP eCLIP23.61■■□□□ 1.37
PTPRA-207ENST00000431048 HELZP42694 1942 aaKnown RBP23.61■■□□□ 1.37
PTPRA-207ENST00000431048 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.6■■□□□ 1.37
PTPRA-207ENST00000431048 TAF4O00268 1085 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 ADAM23O75077 832 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 ATP2C2O75185 946 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 BMP15O95972 392 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 SERPINF2P08697 491 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 ITPKAP23677 461 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 GRIK1P39086 918 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 USP46P62068 366 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 NOP14P78316 857 aaKnown RBP23.6■■□□□ 1.37
PTPRA-207ENST00000431048 KCNA1Q09470 495 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 L1TD1Q5T7N2 865 aaKnown RBP23.6■■□□□ 1.37
PTPRA-207ENST00000431048 EMC10Q5UCC4 262 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 RABEPKQ7Z6M1 372 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 ZSWIM2Q8NEG5 633 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 RASSF8Q8NHQ8 419 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 MYLPFQ96A32 169 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 CAPN10Q9HC96 672 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 CIZ1Q9ULV3 898 aaPredicted RBP23.6■■□□□ 1.37
PTPRA-207ENST00000431048 CPQQ9Y646 472 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 PLXND1Q9Y4D7 1925 aa23.6■■□□□ 1.37
PTPRA-207ENST00000431048 ITPR1Q14643 2758 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 AP5Z1O43299 807 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 ADH1CP00326 375 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 KRT19P08727 400 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 BDNFP23560 247 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 LMO2P25791 158 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 ATXN3P54252 364 aaPredicted RBP23.59■■□□□ 1.37
PTPRA-207ENST00000431048 GFPT1Q06210 699 aaPredicted RBP23.59■■□□□ 1.37
PTPRA-207ENST00000431048 MYO1EQ12965 1108 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 RESTQ13127 1097 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 ZNF423Q2M1K9 1284 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 SLC36A4Q6YBV0 504 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 DDX42Q86XP3 938 aaKnown RBP eCLIP23.59■■□□□ 1.37
PTPRA-207ENST00000431048 KBTBD7Q8WVZ9 684 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 HMGB4Q8WW32 186 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 SAAL1Q96ER3 474 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 MRPL44Q9H9J2 332 aaKnown RBP23.59■■□□□ 1.37
PTPRA-207ENST00000431048 CRTAC1Q9NQ79 661 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 ARHGEF4Q9NR80 690 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 TBC1D14Q9P2M4 693 aa23.59■■□□□ 1.37
PTPRA-207ENST00000431048 FREM2Q5SZK8 3169 aa23.58■■□□□ 1.37
PTPRA-207ENST00000431048 TRIM66O15016 1216 aa23.58■■□□□ 1.37
PTPRA-207ENST00000431048 OPHN1O60890 802 aa23.58■■□□□ 1.37
PTPRA-207ENST00000431048 OAS1P00973 400 aaKnown RBP23.58■■□□□ 1.37
PTPRA-207ENST00000431048 GAP43P17677 238 aa23.58■■□□□ 1.37
PTPRA-207ENST00000431048 ANXA13P27216 316 aa23.58■■□□□ 1.37
PTPRA-207ENST00000431048 GRIN1Q05586 938 aa23.58■■□□□ 1.37
PTPRA-207ENST00000431048 RAB44Q7Z6P3 723 aaPredicted RBP23.58■■□□□ 1.37
PTPRA-207ENST00000431048 C12orf40Q86WS4 652 aa23.58■■□□□ 1.37
PTPRA-207ENST00000431048 PHTF2Q8N3S3 785 aa23.58■■□□□ 1.37
PTPRA-207ENST00000431048 C8orf48Q96LL4 319 aa23.58■■□□□ 1.37
PTPRA-207ENST00000431048 PCDHB13Q9Y5F0 798 aa23.58■■□□□ 1.37
PTPRA-207ENST00000431048 LAMA5O15230 3695 aa23.57■■□□□ 1.36
PTPRA-207ENST00000431048 TCRBV21S2A2A0A5A6 115 aa23.57■■□□□ 1.36
PTPRA-207ENST00000431048 H3BQV1 296 aa23.57■■□□□ 1.36
PTPRA-207ENST00000431048 CFIP05156 583 aa23.57■■□□□ 1.36
PTPRA-207ENST00000431048 ADH5P11766 374 aa23.57■■□□□ 1.36
PTPRA-207ENST00000431048 WARSP23381 471 aaKnown RBP23.57■■□□□ 1.36
PTPRA-207ENST00000431048 DYMQ7RTS9 669 aa23.57■■□□□ 1.36
PTPRA-207ENST00000431048 PROSER1Q86XN7 944 aa23.57■■□□□ 1.36
PTPRA-207ENST00000431048 PGBD3Q8N328 593 aa23.57■■□□□ 1.36
PTPRA-207ENST00000431048 CHCHD4Q8N4Q1 142 aa23.57■■□□□ 1.36
PTPRA-207ENST00000431048 MYCBPAPQ8TBZ2 947 aa23.57■■□□□ 1.36
PTPRA-207ENST00000431048 OTUB2Q96DC9 234 aa23.57■■□□□ 1.36
PTPRA-207ENST00000431048 MTMR12Q9C0I1 747 aa23.57■■□□□ 1.36
PTPRA-207ENST00000431048 PDE11AQ9HCR9 933 aa23.57■■□□□ 1.36
PTPRA-207ENST00000431048 CFAP97Q9P2B7 532 aa23.57■■□□□ 1.36
PTPRA-207ENST00000431048 E2F8A0AVK6 867 aa23.56■■□□□ 1.36
PTPRA-207ENST00000431048 TMEM191BP0C7N4 346 aa23.56■■□□□ 1.36
PTPRA-207ENST00000431048 PSMC1P62191 440 aaKnown RBP23.56■■□□□ 1.36
PTPRA-207ENST00000431048 FAM193AP78312 1265 aa23.56■■□□□ 1.36
PTPRA-207ENST00000431048 PREPLQ4J6C6 727 aaPredicted RBP23.56■■□□□ 1.36
PTPRA-207ENST00000431048 TRMT11Q7Z4G4 463 aaKnown RBP23.56■■□□□ 1.36
PTPRA-207ENST00000431048 DNAJC19Q96DA6 116 aa23.56■■□□□ 1.36
PTPRA-207ENST00000431048 HPDLQ96IR7 371 aa23.56■■□□□ 1.36
PTPRA-207ENST00000431048 DUSP9Q99956 384 aaKnown RBP23.56■■□□□ 1.36
PTPRA-207ENST00000431048 OLFML3Q9NRN5 406 aa23.56■■□□□ 1.36
PTPRA-207ENST00000431048 INTS13Q9NVM9 706 aa23.56■■□□□ 1.36
PTPRA-207ENST00000431048 DNAAF2Q9NVR5 837 aaKnown RBP23.56■■□□□ 1.36
PTPRA-207ENST00000431048 STK17AQ9UEE5 414 aa23.56■■□□□ 1.36
PTPRA-207ENST00000431048 R3HCC1Q9Y3T6 440 aaKnown RBP23.56■■□□□ 1.36
PTPRA-207ENST00000431048 ATXN2Q99700 1313 aaKnown RBP23.56■■□□□ 1.36
PTPRA-207ENST00000431048 ARHGAP33O14559 1287 aa23.55■■□□□ 1.36
PTPRA-207ENST00000431048 FAM163BP0C2L3 166 aa23.55■■□□□ 1.36
PTPRA-207ENST00000431048 CD59P13987 128 aa23.55■■□□□ 1.36
PTPRA-207ENST00000431048 RPL6Q02878 288 aaKnown RBP23.55■■□□□ 1.36
PTPRA-207ENST00000431048 GAD2Q05329 585 aa23.55■■□□□ 1.36
PTPRA-207ENST00000431048 SLC14A1Q13336 389 aa23.55■■□□□ 1.36
PTPRA-207ENST00000431048 ALCAMQ13740 583 aa23.55■■□□□ 1.36
PTPRA-207ENST00000431048 TDRD10Q5VZ19 366 aaKnown RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms