RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 KCNB1Q14721 858 aa18.19■□□□□ 0.5
CPSF4-203ENST00000430038 PPP2R5DQ14738 602 aa18.19■□□□□ 0.5
CPSF4-203ENST00000430038 SV2AQ7L0J3 742 aa18.19■□□□□ 0.5
CPSF4-203ENST00000430038 WDR5BQ86VZ2 330 aa18.19■□□□□ 0.5
CPSF4-203ENST00000430038 FSIP1Q8NA03 581 aa18.19■□□□□ 0.5
CPSF4-203ENST00000430038 ZMIZ2Q8NF64 920 aa18.19■□□□□ 0.5
CPSF4-203ENST00000430038 WBP2Q969T9 261 aa18.19■□□□□ 0.5
CPSF4-203ENST00000430038 SYAP1Q96A49 352 aaPredicted RBP18.19■□□□□ 0.5
CPSF4-203ENST00000430038 GDPD2Q9HCC8 539 aa18.19■□□□□ 0.5
CPSF4-203ENST00000430038 TRPM5Q9NZQ8 1165 aa18.19■□□□□ 0.5
CPSF4-203ENST00000430038 CHORDC1Q9UHD1 332 aaPredicted RBP18.19■□□□□ 0.5
CPSF4-203ENST00000430038 MAPK8IP1Q9UQF2 711 aa18.19■□□□□ 0.5
CPSF4-203ENST00000430038 TRIM66O15016 1216 aa18.18■□□□□ 0.5
CPSF4-203ENST00000430038 ANXA13P27216 316 aa18.18■□□□□ 0.5
CPSF4-203ENST00000430038 ATXN1P54253 815 aaKnown RBP18.18■□□□□ 0.5
CPSF4-203ENST00000430038 SLC7A9P82251 487 aa18.18■□□□□ 0.5
CPSF4-203ENST00000430038 PUM1Q14671 1186 aaKnown RBP eCLIP18.18■□□□□ 0.5
CPSF4-203ENST00000430038 ZNF699Q32M78 642 aa18.18■□□□□ 0.5
CPSF4-203ENST00000430038 ZACNQ401N2 412 aa18.18■□□□□ 0.5
CPSF4-203ENST00000430038 LAIR1Q6GTX8 287 aa18.18■□□□□ 0.5
CPSF4-203ENST00000430038 ACOT1Q86TX2 421 aa18.18■□□□□ 0.5
CPSF4-203ENST00000430038 FAM35AQ86V20 835 aa18.18■□□□□ 0.5
CPSF4-203ENST00000430038 ADGRG2Q8IZP9 1017 aa18.18■□□□□ 0.5
CPSF4-203ENST00000430038 FUKQ8N0W3 1084 aa18.18■□□□□ 0.5
CPSF4-203ENST00000430038 FAM160A2Q8N612 972 aaPredicted RBP18.18■□□□□ 0.5
CPSF4-203ENST00000430038 ZFRQ96KR1 1074 aaKnown RBP18.18■□□□□ 0.5
CPSF4-203ENST00000430038 CEP295NLQ96MC4 621 aa18.18■□□□□ 0.5
CPSF4-203ENST00000430038 SMOQ99835 787 aa18.18■□□□□ 0.5
CPSF4-203ENST00000430038 SMPD4Q9NXE4 827 aa18.18■□□□□ 0.5
CPSF4-203ENST00000430038 IL37Q9NZH6 218 aa18.18■□□□□ 0.5
CPSF4-203ENST00000430038 CPQQ9Y646 472 aa18.18■□□□□ 0.5
CPSF4-203ENST00000430038 LAMA1P25391 3075 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 ABL1P00519 1130 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 CHRM1P11229 460 aaPredicted RBP18.17■□□□□ 0.5
CPSF4-203ENST00000430038 SYKP43405 635 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 SLC6A11P48066 632 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 IFNAR2P48551 515 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 FOXK2Q01167 660 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 PPP3CAQ08209 521 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 ZNF667Q5HYK9 610 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 DGLUCYQ7Z3D6 616 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 FILIP1Q7Z7B0 1213 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 CPA6Q8N4T0 437 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 C12orf29Q8N999 325 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 RPLP0P6Q8NHW5 317 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 GOLGA5Q8TBA6 731 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 CD101Q93033 1021 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 ATP2A3Q93084 1043 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 TWNKQ96RR1 684 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 ELOVL4Q9GZR5 314 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 APOBEC3GQ9HC16 384 aaKnown RBP18.17■□□□□ 0.5
CPSF4-203ENST00000430038 USP18Q9UMW8 372 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 TRAF3IP3Q9Y228 551 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 GTF3C3Q9Y5Q9 886 aa18.17■□□□□ 0.5
CPSF4-203ENST00000430038 K7EQS6 105 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 GDF9O60383 454 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 AKAP3O75969 853 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 RHOBTB3O94955 611 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 CYP17A1P05093 508 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 RETP07949 1114 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 CCDC130P13994 396 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 DRD1P21728 446 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 ASPAP45381 313 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 CEP135Q66GS9 1140 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 C12orf40Q86WS4 652 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 NUP93Q8N1F7 819 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 TMC2Q8TDI7 906 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 HHIPQ96QV1 700 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 USP25Q9UHP3 1055 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 GMEB2Q9UKD1 530 aa18.16■□□□□ 0.5
CPSF4-203ENST00000430038 COCHO43405 550 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 ASS1P00966 412 aaKnown RBP18.15■□□□□ 0.5
CPSF4-203ENST00000430038 HLA-DRAP01903 254 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 TRIM49P0CI25 452 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 TRIM49CP0CI26 452 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 YWHAQP27348 245 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 CNR2P34972 360 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 NDST1P52848 882 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 AP3M2P53677 418 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 KRT85P78386 507 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 CCDC6Q16204 474 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 RHBDF2Q6PJF5 856 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 KRBA2Q6ZNG9 492 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 KBTBD6Q86V97 674 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 CRYBG2Q8N1P7 616 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 EEF2KMTQ96G04 330 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 CCSER2Q9H7U1 834 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 SEMA4GQ9NTN9 838 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 CFAP97Q9P2B7 532 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 RAB23Q9ULC3 237 aa18.15■□□□□ 0.5
CPSF4-203ENST00000430038 FAM92AA1XBS5 289 aa18.14■□□□□ 0.49
CPSF4-203ENST00000430038 DCDC2BA2VCK2 349 aa18.14■□□□□ 0.49
CPSF4-203ENST00000430038 DCLK1O15075 740 aa18.14■□□□□ 0.49
CPSF4-203ENST00000430038 AXIN1O15169 862 aa18.14■□□□□ 0.49
CPSF4-203ENST00000430038 ZDHHC11BP0C7U3 371 aa18.14■□□□□ 0.49
CPSF4-203ENST00000430038 HNRNPLP14866 589 aaKnown RBP eCLIP18.14■□□□□ 0.49
CPSF4-203ENST00000430038 PFKLP17858 780 aa18.14■□□□□ 0.49
CPSF4-203ENST00000430038 GCLMP48507 274 aa18.14■□□□□ 0.49
CPSF4-203ENST00000430038 SLC5A3P53794 718 aa18.14■□□□□ 0.49
CPSF4-203ENST00000430038 DHCR24Q15392 516 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms