RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 NHSQ6T4R5 1651 aa13.02□□□□□ -0.32
CDH3-202ENST00000429102 VWA5AO00534 786 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 OPHN1O60890 802 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 ATP5HO75947 161 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 MUTP22033 750 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 GARTP22102 1010 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 SESN2P58004 480 aaPredicted RBP13.02□□□□□ -0.33
CDH3-202ENST00000429102 BST1Q10588 318 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 TRMT10BQ6PF06 316 aaKnown RBP13.02□□□□□ -0.33
CDH3-202ENST00000429102 TEX9Q8N6V9 391 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 C12orf29Q8N999 325 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 NSUN6Q8TEA1 469 aaKnown RBP13.02□□□□□ -0.33
CDH3-202ENST00000429102 WRNIP1Q96S55 665 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 ADPGKQ9BRR6 497 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 DCLRE1BQ9H816 532 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 FAM49BQ9NUQ9 324 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 ZC3H7BQ9UGR2 993 aaKnown RBP13.02□□□□□ -0.33
CDH3-202ENST00000429102 ATP8B3O60423 1300 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 CALB1P05937 261 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 CXCL8P10145 99 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 GNAZP19086 355 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 PGGT1BP53609 377 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 PTP4A2Q12974 167 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 DPYSL3Q14195 570 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 OASLQ15646 514 aaKnown RBP13.02□□□□□ -0.33
CDH3-202ENST00000429102 TREML1Q86YW5 311 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 SAMD3Q8N6K7 520 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 ARFGAP1Q8N6T3 406 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 SMC1BQ8NDV3 1235 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 SLC26A7Q8TE54 656 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 FBXL18Q96ME1 805 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 LPIN3Q9BQK8 851 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 PCDH9Q9HC56 1237 aa13.02□□□□□ -0.33
CDH3-202ENST00000429102 ZWINTO95229 277 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 KDELR1P24390 212 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 RBL1P28749 1068 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 ATXN1P54253 815 aaKnown RBP13.01□□□□□ -0.33
CDH3-202ENST00000429102 RPL10AP62906 217 aaKnown RBP13.01□□□□□ -0.33
CDH3-202ENST00000429102 LRRC74BQ6ZQY2 392 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 SULF1Q8IWU6 871 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 TWNKQ96RR1 684 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 UNKQ9C0B0 810 aaKnown RBP13.01□□□□□ -0.33
CDH3-202ENST00000429102 SCOCQ9UIL1 159 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 CNTNAP1P78357 1384 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 A0A0B4J269 797 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 IQANK1A0A1B0GTG1 560 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 MAP3K7O43318 606 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 PDGFRAP16234 1089 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 SERPINB6P35237 376 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 C1QBPQ07021 282 aaKnown RBP13.01□□□□□ -0.33
CDH3-202ENST00000429102 LY6KQ17RY6 165 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 Q3C1V9 767 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 SPDYE2Q495Y8 402 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 SLC45A4Q5BKX6 768 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 VWA5B1Q5TIE3 1220 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 IZUMO2Q6UXV1 221 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 RGS9BPQ6ZS82 235 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 OXNAD1Q96HP4 312 aaPredicted RBP13.01□□□□□ -0.33
CDH3-202ENST00000429102 PAPOLBQ9NRJ5 636 aaKnown RBP13.01□□□□□ -0.33
CDH3-202ENST00000429102 AK5Q9Y6K8 562 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 A0A1B0GVG6 124 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 PRR5-ARHGAP8B1AHC4 643 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 C2CD2LO14523 706 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 PRPF4O43172 522 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDH3-202ENST00000429102 ATP6V1C1P21283 382 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 VHLP40337 213 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 CACNA2D1P54289 1103 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 ARHGAP8P85298 464 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 SATB1Q01826 763 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 ROR1Q01973 937 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 ACVR2BQ13705 512 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 ZNF677Q86XU0 584 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 PHF13Q86YI8 300 aaPredicted RBP13.01□□□□□ -0.33
CDH3-202ENST00000429102 RNF148Q8N7C7 305 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 RBM15BQ8NDT2 890 aaKnown RBP13.01□□□□□ -0.33
CDH3-202ENST00000429102 GSTCDQ8NEC7 633 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 GBP5Q96PP8 586 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 TRIM4Q9C037 500 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 MAN1C1Q9NR34 630 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 EURLQ9NYK6 297 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 ARHGAP28Q9P2N2 729 aa13.01□□□□□ -0.33
CDH3-202ENST00000429102 TRPC5Q9UL62 973 aaPredicted RBP13.01□□□□□ -0.33
CDH3-202ENST00000429102 PPP1R12AO14974 1030 aaPredicted RBP13□□□□□ -0.33
CDH3-202ENST00000429102 WDR46O15213 610 aaKnown RBP13□□□□□ -0.33
CDH3-202ENST00000429102 PSMG1O95456 288 aa13□□□□□ -0.33
CDH3-202ENST00000429102 ZBED1O96006 694 aa13□□□□□ -0.33
CDH3-202ENST00000429102 SKIP12755 728 aa13□□□□□ -0.33
CDH3-202ENST00000429102 KCNA2P16389 499 aa13□□□□□ -0.33
CDH3-202ENST00000429102 NUMBP49757 651 aa13□□□□□ -0.33
CDH3-202ENST00000429102 CXCL9Q07325 125 aa13□□□□□ -0.33
CDH3-202ENST00000429102 CAPSQ13938 189 aa13□□□□□ -0.33
CDH3-202ENST00000429102 DUOXA2Q1HG44 320 aa13□□□□□ -0.33
CDH3-202ENST00000429102 KLHL38Q2WGJ6 581 aa13□□□□□ -0.33
CDH3-202ENST00000429102 XKR3Q5GH77 459 aa13□□□□□ -0.33
CDH3-202ENST00000429102 IL31Q6EBC2 164 aa13□□□□□ -0.33
CDH3-202ENST00000429102 SLC30A9Q6PML9 568 aa13□□□□□ -0.33
CDH3-202ENST00000429102 NIM1KQ8IY84 436 aa13□□□□□ -0.33
CDH3-202ENST00000429102 KCTD17Q8N5Z5 321 aa13□□□□□ -0.33
CDH3-202ENST00000429102 PGBD4Q96DM1 585 aa13□□□□□ -0.33
CDH3-202ENST00000429102 USP18Q9UMW8 372 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms