RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 SLC5A2P31639 672 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 FDFT1P37268 417 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 BASP1P80723 227 aaKnown RBP17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 IYDQ6PHW0 289 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 CTAGE3PQ8IX95 158 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 DCAF4Q8WV16 495 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 SLC44A1Q8WWI5 657 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 PRPF31Q8WWY3 499 aaKnown RBP17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 TRIM11Q96F44 468 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 C7orf26Q96N11 449 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 APOL6Q9BWW8 343 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 KCND2Q9NZV8 630 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 DRG1Q9Y295 367 aaKnown RBP17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 BOLA2-SMG1P6H3BVE0 249 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 ITGAVP06756 1048 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 NOMO3P69849 1222 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 OGDHQ02218 1023 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 SFSWAPQ12872 951 aaKnown RBP17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 CBX3Q13185 183 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 SNAPC2Q13487 334 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 SMTNL2Q2TAL5 461 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 AMIGO3Q86WK7 504 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 ACTL9Q8TC94 416 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 PPME1Q9Y570 386 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 PCDHB2Q9Y5E7 798 aa17.09■□□□□ 0.33
RHBDF1-204ENST00000428730 H3BNX3 289 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 KLF11O14901 512 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 PMM2O15305 246 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 UGT1A9O60656 530 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 LYPLA1O75608 230 aaPredicted RBP17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 IL1BP01584 269 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 SERPINA6P08185 405 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 IL1R1P14778 569 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 OTUD4Q01804 1114 aaKnown RBP17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 TRIM67Q6ZTA4 783 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 SLF2Q8IX21 1173 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 FEZF2Q8TBJ5 459 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 NKD2Q969F2 451 aaPredicted RBP17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 CNBD2Q96M20 576 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 SENP6Q9GZR1 1112 aaPredicted RBP17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 UGT1A7Q9HAW7 530 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 UGT1A10Q9HAW8 530 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 UGT1A8Q9HAW9 530 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 NDUFA13Q9P0J0 144 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 DTNAQ9Y4J8 743 aa17.08■□□□□ 0.33
RHBDF1-204ENST00000428730 CXorf49A8MYA2 514 aaPredicted RBP17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 GDF11O95390 407 aa17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 NDUFB10O96000 172 aa17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 TCP10Q12799 353 aa17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 CYLC2Q14093 348 aaPredicted RBP17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 ACAP1Q15027 740 aa17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 PLEKHA7Q6IQ23 1121 aa17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 UNC45BQ8IWX7 931 aa17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 PPM1NQ8N819 430 aa17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 RIN3Q8TB24 985 aa17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 SLC35B2Q8TB61 432 aa17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 PIP4K2CQ8TBX8 421 aa17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 CFAP36Q96G28 342 aa17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 MCEEQ96PE7 176 aa17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 C1orf21Q9H246 121 aa17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 LIN28AQ9H9Z2 209 aaKnown RBP17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 CDH22Q9UJ99 828 aa17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 POMPQ9Y244 141 aa17.08■□□□□ 0.32
RHBDF1-204ENST00000428730 SDR42E2A6NKP2 422 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 E7ESA3 106 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 CCNT2O60583 730 aaKnown RBP17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 CDKN2BP42772 138 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 COG7P83436 770 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 RSPH3Q86UC2 560 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 CRLF3Q8IUI8 442 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 NUDCD3Q8IVD9 361 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 PDIK1LQ8N165 341 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 DCUN1D1Q96GG9 259 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 PRPF18Q99633 342 aaKnown RBP17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 PLLPQ9Y342 182 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 SF3B1O75533 1304 aaKnown RBP eCLIP17.07■□□□□ 0.323e-8■■■■■ 170.8
RHBDF1-204ENST00000428730 LOC100653049A0A140TA62 436 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 DNAJA2O60884 412 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 KRT34O76011 436 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 SULT2A1Q06520 285 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 TFDP3Q5H9I0 405 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 MAP3K21Q5TCX8 1036 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 KLHL35Q6PF15 583 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 TSHZ1Q6ZSZ6 1077 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 ZNF554Q86TJ5 538 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 SENP7Q9BQF6 1050 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 MRPL1Q9BYD6 325 aaKnown RBP17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 MRPL47Q9HD33 250 aaKnown RBP17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 C1orf112Q9NSG2 853 aa17.07■□□□□ 0.32
RHBDF1-204ENST00000428730 TTLL13PA6NNM8 815 aa17.06■□□□□ 0.32
RHBDF1-204ENST00000428730 H3BSA7 217 aa17.06■□□□□ 0.32
RHBDF1-204ENST00000428730 AP1G1O43747 822 aa17.06■□□□□ 0.32
RHBDF1-204ENST00000428730 WEE2P0C1S8 567 aa17.06■□□□□ 0.32
RHBDF1-204ENST00000428730 GTF2BQ00403 316 aa17.06■□□□□ 0.32
RHBDF1-204ENST00000428730 MYBPC1Q00872 1141 aa17.06■□□□□ 0.32
RHBDF1-204ENST00000428730 DCTN2Q13561 401 aaKnown RBP17.06■□□□□ 0.32
RHBDF1-204ENST00000428730 KCNT1Q5JUK3 1230 aa17.06■□□□□ 0.32
RHBDF1-204ENST00000428730 LRRC8BQ6P9F7 803 aa17.06■□□□□ 0.32
RHBDF1-204ENST00000428730 DEFB107AQ8IZN7 70 aa17.06■□□□□ 0.32
RHBDF1-204ENST00000428730 KCTD17Q8N5Z5 321 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms