RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 TRPM5Q9NZQ8 1165 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 CGNQ9P2M7 1197 aaKnown RBP16.53■□□□□ 0.24
SEC13-210ENST00000428626 CDV3Q9UKY7 258 aaKnown RBP16.53■□□□□ 0.24
SEC13-210ENST00000428626 LRP3O75074 770 aa16.52■□□□□ 0.24
SEC13-210ENST00000428626 CHRM1P11229 460 aaPredicted RBP16.52■□□□□ 0.24
SEC13-210ENST00000428626 PFKFB1P16118 471 aa16.52■□□□□ 0.24
SEC13-210ENST00000428626 ATICP31939 592 aa16.52■□□□□ 0.24
SEC13-210ENST00000428626 SLC7A9P82251 487 aa16.52■□□□□ 0.24
SEC13-210ENST00000428626 IFRD2Q12894 506 aaPredicted RBP16.52■□□□□ 0.24
SEC13-210ENST00000428626 TRPC3Q13507 836 aa16.52■□□□□ 0.24
SEC13-210ENST00000428626 CCDC6Q16204 474 aa16.52■□□□□ 0.24
SEC13-210ENST00000428626 CSRP2Q16527 193 aa16.52■□□□□ 0.24
SEC13-210ENST00000428626 C1orf220Q5T0J3 134 aa16.52■□□□□ 0.24
SEC13-210ENST00000428626 ATL3Q6DD88 541 aa16.52■□□□□ 0.24
SEC13-210ENST00000428626 SCARA5Q6ZMJ2 495 aa16.52■□□□□ 0.24
SEC13-210ENST00000428626 SYAP1Q96A49 352 aaPredicted RBP16.52■□□□□ 0.24
SEC13-210ENST00000428626 RXFP3Q9NSD7 469 aa16.52■□□□□ 0.24
SEC13-210ENST00000428626 HMGXB4Q9UGU5 601 aa16.52■□□□□ 0.24
SEC13-210ENST00000428626 SLC8A2Q9UPR5 921 aa16.52■□□□□ 0.24
SEC13-210ENST00000428626 HPSEQ9Y251 543 aa16.52■□□□□ 0.24
SEC13-210ENST00000428626 CPQQ9Y646 472 aa16.52■□□□□ 0.24
SEC13-210ENST00000428626 ABCA7Q8IZY2 2146 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 CCDC163A0A0D9SF12 145 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.51■□□□□ 0.23
SEC13-210ENST00000428626 K7EQS6 105 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 AXIN1O15169 862 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 ATG13O75143 517 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 RPP40O75818 363 aaKnown RBP16.51■□□□□ 0.23
SEC13-210ENST00000428626 CYP17A1P05093 508 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 HSP90AA1P07900 732 aaKnown RBP16.51■□□□□ 0.23
SEC13-210ENST00000428626 PRR29P0C7W0 189 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 PGFP49763 221 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 AMPD2Q01433 879 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 ORC1Q13415 861 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 BIRC3Q13489 604 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 NCOA4Q13772 614 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 ZNF699Q32M78 642 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 FILIP1Q7Z7B0 1213 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 FAM35AQ86V20 835 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 SLC9A9Q8IVB4 645 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 CEP57L1Q8IYX8 460 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 SCAMP5Q8TAC9 235 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 ZFRQ96KR1 1074 aaKnown RBP16.51■□□□□ 0.23
SEC13-210ENST00000428626 RTKNQ9BST9 563 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 ELOVL4Q9GZR5 314 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 ARRDC1-AS1Q9H2J1 176 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 CFAP45Q9UL16 551 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 ACACBO00763 2458 aa16.51■□□□□ 0.23
SEC13-210ENST00000428626 EPG5Q9HCE0 2579 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 TNFRSF10BO14763 440 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 SLC30A4O14863 429 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 DCLK1O15075 740 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 PHACTR2O75167 634 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 BEST1O76090 585 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 ABL1P00519 1130 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 PDIA4P13667 645 aaKnown RBP16.5■□□□□ 0.23
SEC13-210ENST00000428626 PFKLP17858 780 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 SLC6A11P48066 632 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 DMC1Q14565 340 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 SF3A2Q15428 464 aaKnown RBP16.5■□□□□ 0.23
SEC13-210ENST00000428626 FBXO43Q4G163 708 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 SPOPLQ6IQ16 392 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 SYT13Q7L8C5 426 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 C12orf40Q86WS4 652 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 ADGRG2Q8IZP9 1017 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 CAMKK1Q8N5S9 505 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 ZMIZ2Q8NF64 920 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 USP33Q8TEY7 942 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 TMEM174Q8WUU8 243 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 WBP2Q969T9 261 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 SMOC1Q9H4F8 434 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 EXOC1Q9NV70 894 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 IL37Q9NZH6 218 aa16.5■□□□□ 0.23
SEC13-210ENST00000428626 EPN2O95208 641 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 NFATC1O95644 943 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 NR3C1P04150 777 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 HNRNPLP14866 589 aaKnown RBP eCLIP16.49■□□□□ 0.23
SEC13-210ENST00000428626 SDHBP21912 280 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 CMA1P23946 247 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 PPP3CCP48454 512 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 SEC13P55735 322 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 PSMD2Q13200 908 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 DHCR24Q15392 516 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 ZACNQ401N2 412 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 ZNF667Q5HYK9 610 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 RHBDF2Q6PJF5 856 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 CACNA2D4Q7Z3S7 1137 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 ACOT1Q86TX2 421 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 FUKQ8N0W3 1084 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 NUP93Q8N1F7 819 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 GOLGA5Q8TBA6 731 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 NETO1Q8TDF5 533 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 SMOQ99835 787 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 CFAP97Q9P2B7 532 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 CHORDC1Q9UHD1 332 aaPredicted RBP16.49■□□□□ 0.23
SEC13-210ENST00000428626 MYO18AQ92614 2054 aaKnown RBP16.49■□□□□ 0.23
SEC13-210ENST00000428626 LAMA1P25391 3075 aa16.49■□□□□ 0.23
SEC13-210ENST00000428626 PDXKO00764 312 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 COCHO43405 550 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 CCDC192P0DO97 292 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms