RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 TMPRSS12Q86WS5 348 aa12.8□□□□□ -0.36
DDX39B-208ENST00000428098 DCP1BQ8IZD4 617 aaKnown RBP12.8□□□□□ -0.36
DDX39B-208ENST00000428098 ZNF513Q8N8E2 541 aaPredicted RBP12.8□□□□□ -0.36
DDX39B-208ENST00000428098 NAT16Q8N8M0 369 aa12.8□□□□□ -0.36
DDX39B-208ENST00000428098 C1orf216Q8TAB5 229 aa12.8□□□□□ -0.36
DDX39B-208ENST00000428098 IPO4Q8TEX9 1081 aaKnown RBP12.8□□□□□ -0.36
DDX39B-208ENST00000428098 FOXJ1Q92949 421 aa12.8□□□□□ -0.36
DDX39B-208ENST00000428098 PYM1Q9BRP8 204 aaKnown RBP12.8□□□□□ -0.36
DDX39B-208ENST00000428098 NTPCRQ9BSD7 190 aaKnown RBP12.8□□□□□ -0.36
DDX39B-208ENST00000428098 MIR1-1HGQ9H1L0 117 aa12.8□□□□□ -0.36
DDX39B-208ENST00000428098 SLCO1B1Q9Y6L6 691 aa12.8□□□□□ -0.36
DDX39B-208ENST00000428098 COL5A1P20908 1838 aaPredicted RBP12.8□□□□□ -0.36
DDX39B-208ENST00000428098 MYO9AB2RTY4 2548 aa12.79□□□□□ -0.36
DDX39B-208ENST00000428098 A0A1B0GVT2 93 aa12.79□□□□□ -0.36
DDX39B-208ENST00000428098 NTSR1P30989 418 aa12.79□□□□□ -0.36
DDX39B-208ENST00000428098 PPP2R3AQ06190 1150 aa12.79□□□□□ -0.36
DDX39B-208ENST00000428098 COLEC12Q5KU26 742 aa12.79□□□□□ -0.36
DDX39B-208ENST00000428098 METTL23Q86XA0 190 aa12.79□□□□□ -0.36
DDX39B-208ENST00000428098 ETFBKMTQ8IXQ9 262 aa12.79□□□□□ -0.36
DDX39B-208ENST00000428098 SNIP1Q8TAD8 396 aaKnown RBP12.79□□□□□ -0.36
DDX39B-208ENST00000428098 KCNV2Q8TDN2 545 aa12.79□□□□□ -0.36
DDX39B-208ENST00000428098 WBP1Q96G27 269 aa12.79□□□□□ -0.36
DDX39B-208ENST00000428098 RUSC1Q9BVN2 902 aa12.79□□□□□ -0.36
DDX39B-208ENST00000428098 DSEQ9UL01 958 aa12.79□□□□□ -0.36
DDX39B-208ENST00000428098 KIAA1024Q9UPX6 916 aa12.79□□□□□ -0.36
DDX39B-208ENST00000428098 RAD54BQ9Y620 910 aa12.79□□□□□ -0.36
DDX39B-208ENST00000428098 AK5Q9Y6K8 562 aa12.79□□□□□ -0.36
DDX39B-208ENST00000428098 DOPEY2Q9Y3R5 2298 aa12.79□□□□□ -0.36
DDX39B-208ENST00000428098 BCAT2O15382 392 aaPredicted RBP12.78□□□□□ -0.36
DDX39B-208ENST00000428098 CER1O95813 267 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 ADH5P11766 374 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 JUPP14923 745 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 PAX3P23760 479 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 KRT2P35908 639 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 RPL10AP62906 217 aaKnown RBP12.78□□□□□ -0.36
DDX39B-208ENST00000428098 CCDC173Q0VFZ6 552 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 RTP5Q14D33 572 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 LY6G5CQ5SRR4 150 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 EGFLAMQ63HQ2 1017 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 ZPBP2Q6X784 338 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 SPACA3Q8IXA5 215 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 TMEM161BQ8NDZ6 487 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 NXPE2Q96DL1 559 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 FAM212AQ96EL1 285 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 TOE1Q96GM8 510 aaKnown RBP12.78□□□□□ -0.36
DDX39B-208ENST00000428098 MRGPRX1Q96LB2 322 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 PKMYT1Q99640 499 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 ARID3AQ99856 593 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 SMPD4Q9NXE4 827 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 WSB2Q9NYS7 404 aaPredicted RBP12.78□□□□□ -0.36
DDX39B-208ENST00000428098 STARD13Q9Y3M8 1113 aa12.78□□□□□ -0.36
DDX39B-208ENST00000428098 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.78□□□□□ -0.36
DDX39B-208ENST00000428098 NOTCH2Q04721 2471 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 KCNJ18B7U540 433 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 WASH3PC4AMC7 463 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 E9PMD0 336 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 XPOTO43592 962 aaKnown RBP12.77□□□□□ -0.37
DDX39B-208ENST00000428098 SLC28A2O43868 658 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 TULP3O75386 442 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 CTDNEP1O95476 244 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 MAPTP10636 758 aaKnown RBP12.77□□□□□ -0.37
DDX39B-208ENST00000428098 C6P13671 934 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 FDPSP14324 419 aaKnown RBP12.77□□□□□ -0.37
DDX39B-208ENST00000428098 ACAT1P24752 427 aaKnown RBP12.77□□□□□ -0.37
DDX39B-208ENST00000428098 MCM7P33993 719 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 MATR3P43243 847 aaKnown RBP eCLIP12.77□□□□□ -0.376e-9■□□□□ 9.9
DDX39B-208ENST00000428098 CSNK1EP49674 416 aaKnown RBP12.77□□□□□ -0.37
DDX39B-208ENST00000428098 SLC7A9P82251 487 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 STRN3Q13033 797 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 TARDBPQ13148 414 aaKnown RBP eCLIP12.77□□□□□ -0.37
DDX39B-208ENST00000428098 KIF19Q2TAC6 998 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 C10orf76Q5T2E6 689 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 SCARA3Q6AZY7 606 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 CPLX2Q6PUV4 134 aaKnown RBP12.77□□□□□ -0.37
DDX39B-208ENST00000428098 C1orf186Q6ZWK4 172 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 RUFY3Q7L099 469 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 SKAP1Q86WV1 359 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 ERMNQ8TAM6 284 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 FGF11Q92914 225 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 GPR174Q9BXC1 333 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 CCSER1Q9C0I3 900 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 CFAP97Q9P2B7 532 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 GTF3C4Q9UKN8 822 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 NFE2L3Q9Y4A8 694 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 SNX11Q9Y5W9 270 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 CPQQ9Y646 472 aa12.77□□□□□ -0.37
DDX39B-208ENST00000428098 SPTAN1Q13813 2472 aaKnown RBP12.76□□□□□ -0.37
DDX39B-208ENST00000428098 METTL12A8MUP2 240 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 MEI4A8MW99 385 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 HCRTO43612 131 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 NCAM1P13591 858 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 XBP1P17861 261 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 MUTP22033 750 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 CD6P30203 668 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 CCT6AP40227 531 aaKnown RBP12.76□□□□□ -0.37
DDX39B-208ENST00000428098 IL12RB1P42701 662 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 CSRP3P50461 194 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 USP46P62068 366 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 KCNH2Q12809 1159 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 PDIA5Q14554 519 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms