RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TAS1R2Q8TE23 839 aa19.55■□□□□ 0.72
PSPC1-202ENST00000427943 OSCP1Q8WVF1 389 aa19.55■□□□□ 0.72
PSPC1-202ENST00000427943 TAF4BQ92750 862 aa19.55■□□□□ 0.72
PSPC1-202ENST00000427943 ERCC4Q92889 916 aaPredicted RBP19.55■□□□□ 0.72
PSPC1-202ENST00000427943 KRT82Q9NSB4 513 aa19.55■□□□□ 0.72
PSPC1-202ENST00000427943 FAM49BQ9NUQ9 324 aa19.55■□□□□ 0.72
PSPC1-202ENST00000427943 ARHGAP26Q9UNA1 814 aa19.55■□□□□ 0.72
PSPC1-202ENST00000427943 PSMC2P35998 433 aaKnown RBP19.54■□□□□ 0.72
PSPC1-202ENST00000427943 PDE6CP51160 858 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 DMWDQ09019 674 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 TMEM196Q5HYL7 178 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 FSTL4Q6MZW2 842 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 PKN3Q6P5Z2 889 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 MAMSTRQ6ZN01 415 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 FUKQ8N0W3 1084 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 NUP93Q8N1F7 819 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 CPA6Q8N4T0 437 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 ATP2A3Q93084 1043 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 FBXO32Q969P5 355 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 SMARCD1Q96GM5 515 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 SLITRK1Q96PX8 696 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 FAM126AQ9BYI3 521 aaPredicted RBP19.54■□□□□ 0.72
PSPC1-202ENST00000427943 IMPG2Q9BZV3 1241 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 RNF38Q9H0F5 515 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 ECT2Q9H8V3 914 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 APOBEC3GQ9HC16 384 aaKnown RBP19.54■□□□□ 0.72
PSPC1-202ENST00000427943 DMAP1Q9NPF5 467 aaPredicted RBP19.54■□□□□ 0.72
PSPC1-202ENST00000427943 SMPD4Q9NXE4 827 aa19.54■□□□□ 0.72
PSPC1-202ENST00000427943 SMG5Q9UPR3 1016 aaKnown RBP19.54■□□□□ 0.72
PSPC1-202ENST00000427943 LEFTY2O00292 366 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 SCAMP3O14828 347 aaKnown RBP19.53■□□□□ 0.72
PSPC1-202ENST00000427943 AP1G2O75843 785 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 OAS1P00973 400 aaKnown RBP19.53■□□□□ 0.72
PSPC1-202ENST00000427943 YWHAQP27348 245 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 HOXC13P31276 330 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 GJA4P35212 333 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 SLC5A3P53794 718 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 EML3Q32P44 896 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 EDRF1Q3B7T1 1238 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 ENGASEQ8NFI3 743 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 SCAMP5Q8TAC9 235 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 SLC2A14Q8TDB8 520 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 RUBCNQ92622 972 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 TWNKQ96RR1 684 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 EPC1Q9H2F5 836 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 FBRSL1Q9HCM7 1045 aaKnown RBP19.53■□□□□ 0.72
PSPC1-202ENST00000427943 RMND1Q9NWS8 449 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 CPQQ9Y646 472 aa19.53■□□□□ 0.72
PSPC1-202ENST00000427943 GPR179Q6PRD1 2367 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 DMXL1Q9Y485 3027 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 CHURC1-FNTBB4DL54 471 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 K7ESF4 209 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 TRDMT1O14717 391 aaKnown RBP19.52■□□□□ 0.72
PSPC1-202ENST00000427943 RTN3O95197 1032 aaPredicted RBP19.52■□□□□ 0.72
PSPC1-202ENST00000427943 OLFM2O95897 454 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 EGFP01133 1207 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 TCF3P15923 654 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 PFKLP17858 780 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 ADORA2BP29275 332 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 PRCPP42785 496 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 PPP3CCP48454 512 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 FNTBP49356 437 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 NRLP54845 237 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 GRSF1Q12849 480 aaKnown RBP eCLIP19.52■□□□□ 0.72
PSPC1-202ENST00000427943 HEATR6Q6AI08 1181 aaKnown RBP19.52■□□□□ 0.72
PSPC1-202ENST00000427943 UNC93AQ86WB7 457 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 KIAA2013Q8IYS2 634 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 C12orf29Q8N999 325 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 ZMIZ2Q8NF64 920 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 SMOQ99835 787 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 LINC00597Q9H2U6 94 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 TMEM8AQ9HCN3 771 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 NCDNQ9UBB6 729 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 RALGAPA1Q6GYQ0 2036 aa19.52■□□□□ 0.72
PSPC1-202ENST00000427943 TNFRSF10BO14763 440 aa19.51■□□□□ 0.71
PSPC1-202ENST00000427943 BEST1O76090 585 aa19.51■□□□□ 0.71
PSPC1-202ENST00000427943 MBL2P11226 248 aaPredicted RBP19.51■□□□□ 0.71
PSPC1-202ENST00000427943 CD58P19256 250 aa19.51■□□□□ 0.71
PSPC1-202ENST00000427943 SLC7A9P82251 487 aa19.51■□□□□ 0.71
PSPC1-202ENST00000427943 AMPD2Q01433 879 aa19.51■□□□□ 0.71
PSPC1-202ENST00000427943 LPAL2Q16609 132 aa19.51■□□□□ 0.71
PSPC1-202ENST00000427943 ZNF658Q5TYW1 1059 aaPredicted RBP19.51■□□□□ 0.71
PSPC1-202ENST00000427943 CRYBG2Q8N1P7 616 aa19.51■□□□□ 0.71
PSPC1-202ENST00000427943 SYNPOQ8N3V7 929 aa19.51■□□□□ 0.71
PSPC1-202ENST00000427943 PDZD8Q8NEN9 1154 aa19.51■□□□□ 0.71
PSPC1-202ENST00000427943 P2RY13Q9BPV8 354 aa19.51■□□□□ 0.71
PSPC1-202ENST00000427943 NIF3L1Q9GZT8 377 aa19.51■□□□□ 0.71
PSPC1-202ENST00000427943 PCDHA5Q9Y5H7 936 aa19.51■□□□□ 0.71
PSPC1-202ENST00000427943 CETN3O15182 167 aa19.5■□□□□ 0.71
PSPC1-202ENST00000427943 PAPSS2O95340 614 aaPredicted RBP19.5■□□□□ 0.71
PSPC1-202ENST00000427943 EPB41P11171 864 aaKnown RBP19.5■□□□□ 0.71
PSPC1-202ENST00000427943 MXI1P50539 228 aa19.5■□□□□ 0.71
PSPC1-202ENST00000427943 GALK1P51570 392 aa19.5■□□□□ 0.71
PSPC1-202ENST00000427943 MAP3K7CLP57077 242 aa19.5■□□□□ 0.71
PSPC1-202ENST00000427943 ENPEPQ07075 957 aa19.5■□□□□ 0.71
PSPC1-202ENST00000427943 INCA1Q0VD86 236 aa19.5■□□□□ 0.71
PSPC1-202ENST00000427943 SRSF5Q13243 272 aaKnown RBP19.5■□□□□ 0.71
PSPC1-202ENST00000427943 FILIP1Q7Z7B0 1213 aa19.5■□□□□ 0.71
PSPC1-202ENST00000427943 SMARCE1Q969G3 411 aa19.5■□□□□ 0.71
PSPC1-202ENST00000427943 JAKMIP2Q96AA8 810 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms