RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 MXD4Q14582 209 aaPredicted RBP14.94□□□□□ -0.02
LIG1-202ENST00000427526 AGGF1Q8N302 714 aaeCLIP14.94□□□□□ -0.02
LIG1-202ENST00000427526 BANPQ8N9N5 519 aa14.94□□□□□ -0.02
LIG1-202ENST00000427526 RSAD2Q8WXG1 361 aa14.94□□□□□ -0.02
LIG1-202ENST00000427526 BCO2Q9BYV7 579 aa14.94□□□□□ -0.02
LIG1-202ENST00000427526 ECM2O94769 699 aaPredicted RBP14.94□□□□□ -0.02
LIG1-202ENST00000427526 ADRA1DP25100 572 aa14.94□□□□□ -0.02
LIG1-202ENST00000427526 GBP2P32456 591 aaPredicted RBP14.94□□□□□ -0.02
LIG1-202ENST00000427526 RAD23BP54727 409 aa14.94□□□□□ -0.02
LIG1-202ENST00000427526 KLHL38Q2WGJ6 581 aa14.94□□□□□ -0.02
LIG1-202ENST00000427526 ZNF792Q3KQV3 632 aa14.94□□□□□ -0.02
LIG1-202ENST00000427526 PLEKHG4Q58EX7 1191 aa14.94□□□□□ -0.02
LIG1-202ENST00000427526 TAPT1Q6NXT6 567 aa14.94□□□□□ -0.02
LIG1-202ENST00000427526 EMC1Q8N766 993 aa14.94□□□□□ -0.02
LIG1-202ENST00000427526 SMAPO00193 183 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 C2CD2LO14523 706 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 TRAFD1O14545 582 aaPredicted RBP14.93□□□□□ -0.02
LIG1-202ENST00000427526 MED7O43513 233 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 ERBB2P04626 1255 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 TSHRP16473 764 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 RAP1GAPP47736 663 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 IGBP1P78318 339 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 SLC45A4Q5BKX6 768 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 MPZL3Q6UWV2 235 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 MAB21L3Q8N8X9 362 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 TCP10LQ8TDR4 215 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 RSRC1Q96IZ7 334 aaKnown RBP14.93□□□□□ -0.02
LIG1-202ENST00000427526 SMARCAD1Q9H4L7 1026 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 NXF1Q9UBU9 619 aaKnown RBP14.93□□□□□ -0.02
LIG1-202ENST00000427526 APOC4-APOC2K7ER74 178 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 TM9SF1O15321 606 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 DIAPH2O60879 1101 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 APOC2P02655 101 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 CD19P15391 556 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 CLCN3P51790 818 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 CCNA1P78396 465 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 TAF5Q15542 800 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 C11orf91Q3C1V1 193 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 ZBTB8OSQ8IWT0 167 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 ZNF398Q8TD17 642 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 NLRP4Q96MN2 994 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 METTL5Q9NRN9 209 aaKnown RBP14.93□□□□□ -0.02
LIG1-202ENST00000427526 WDR35Q9P2L0 1181 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 XPO7Q9UIA9 1087 aaKnown RBP14.93□□□□□ -0.02
LIG1-202ENST00000427526 SIX4Q9UIU6 781 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 NUMBLQ9Y6R0 609 aa14.93□□□□□ -0.02
LIG1-202ENST00000427526 TNNC2P02585 160 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 GTF2A2P52657 109 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 CDH8P55286 799 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 ARHGAP1Q07960 439 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 DPYSL3Q14195 570 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 CDR2LQ86X02 465 aaPredicted RBP14.92□□□□□ -0.02
LIG1-202ENST00000427526 FAM71DQ8N9W8 422 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 KCTD6Q8NC69 237 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 ANKRD36BP1Q96IX9 119 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 SDCBP2Q9H190 292 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 VPS11Q9H270 941 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 FZD8Q9H461 694 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 KANSL3Q9P2N6 904 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 MGAMO43451 1857 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 ANK1P16157 1881 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 ACKR2O00590 384 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 GAS2O43903 313 aaKnown RBP14.92□□□□□ -0.02
LIG1-202ENST00000427526 MIPP30301 263 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 GABRB2P47870 512 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 SLC8A3P57103 927 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 CTC1Q2NKJ3 1217 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 EFCAB12Q6NXP0 572 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 MAMDC4Q6UXC1 1216 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 IGDCC3Q8IVU1 814 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 PALM2Q8IXS6 379 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 PDIK1LQ8N165 341 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 ALKBH8Q96BT7 664 aaKnown RBP14.92□□□□□ -0.02
LIG1-202ENST00000427526 ZNF570Q96NI8 536 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 SLC17A7Q9P2U7 560 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 PCSK1NQ9UHG2 260 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 ENDOD1O94919 500 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 ATP2A2P16615 1042 aaKnown RBP14.92□□□□□ -0.02
LIG1-202ENST00000427526 ADCYAP1R1P41586 468 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 EIF3EP60228 445 aaKnown RBP14.92□□□□□ -0.02
LIG1-202ENST00000427526 OSTNP61366 133 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 MTM1Q13496 603 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 ACAP1Q15027 740 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 NLRP9Q7RTR0 991 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 TAB3Q8N5C8 712 aaPredicted RBP14.92□□□□□ -0.02
LIG1-202ENST00000427526 SLC4A11Q8NBS3 891 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 MCRS1Q96EZ8 462 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 TBC1D10AQ9BXI6 508 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 C2orf40Q9H1Z8 148 aa14.92□□□□□ -0.02
LIG1-202ENST00000427526 C12orf65Q9H3J6 166 aaKnown RBP14.92□□□□□ -0.02
LIG1-202ENST00000427526 GBA2Q9HCG7 927 aaPredicted RBP14.92□□□□□ -0.02
LIG1-202ENST00000427526 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.91□□□□□ -0.02
LIG1-202ENST00000427526 TRUB2O95900 331 aaKnown RBP14.91□□□□□ -0.02
LIG1-202ENST00000427526 NRLP54845 237 aa14.91□□□□□ -0.02
LIG1-202ENST00000427526 CRYMQ14894 314 aa14.91□□□□□ -0.02
LIG1-202ENST00000427526 BBS9Q3SYG4 887 aa14.91□□□□□ -0.02
LIG1-202ENST00000427526 TAF1BQ53T94 588 aaPredicted RBP14.91□□□□□ -0.02
LIG1-202ENST00000427526 ATF7IP2Q5U623 682 aa14.91□□□□□ -0.02
LIG1-202ENST00000427526 SH2D5Q6ZV89 423 aa14.91□□□□□ -0.02
LIG1-202ENST00000427526 RFX6Q8HWS3 928 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms