RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 INMTO95050 263 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 TXNP10599 105 aaKnown RBP2.92□□□□□ -1.94
PTPRC-208ENST00000427110 MYL4P12829 197 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 IL1R1P14778 569 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 TPH1P17752 444 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 FBLP22087 321 aaKnown RBP2.92□□□□□ -1.94
PTPRC-208ENST00000427110 PPM1AP35813 382 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 TECP42680 631 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 PTDSS1P48651 473 aaKnown RBP2.92□□□□□ -1.94
PTPRC-208ENST00000427110 CPT1AP50416 773 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 TOB1P50616 345 aaPredicted RBP2.92□□□□□ -1.94
PTPRC-208ENST00000427110 CACNA2D1P54289 1103 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 PROK1P58294 105 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 TAP2Q03519 686 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 TCF15Q12870 199 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 EIF2B5Q13144 721 aaKnown RBP2.92□□□□□ -1.94
PTPRC-208ENST00000427110 E2F2Q14209 437 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 STARD3Q14849 445 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 SLC35G1Q2M3R5 365 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 VPS53Q5VIR6 699 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 KIAA0895LQ68EN5 471 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 SFRP4Q6FHJ7 346 aaPredicted RBP2.92□□□□□ -1.94
PTPRC-208ENST00000427110 RGS7BPQ6MZT1 257 aaPredicted RBP2.92□□□□□ -1.94
PTPRC-208ENST00000427110 SYCE2Q6PIF2 218 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 ZDHHC24Q6UX98 284 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 BEND5Q7L4P6 421 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 TMPRSS9Q7Z410 1059 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 SLC15A3Q8IY34 581 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 SYTL1Q8IYJ3 562 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 SPARTQ8N0X7 666 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.92□□□□□ -1.94
PTPRC-208ENST00000427110 RNF152Q8N8N0 203 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 POF1BQ8WVV4 589 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 SLC9A6Q92581 669 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 SLC39A13Q96H72 371 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 ZC3H10Q96K80 434 aaKnown RBP2.92□□□□□ -1.94
PTPRC-208ENST00000427110 ARPC5LQ9BPX5 153 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 MESP1Q9BRJ9 268 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 ACTRT3Q9BYD9 372 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 SEMA4GQ9NTN9 838 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 GJB4Q9NTQ9 266 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 MYO1AQ9UBC5 1043 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 SERTAD3Q9UJW9 196 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 TNFRSF18Q9Y5U5 241 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 ADGRA2Q96PE1 1338 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 A0A1W2PPC4 97 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 PODXLO00592 558 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 MPPED1O15442 326 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 PROM1O43490 865 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 SRGAP2O75044 1071 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 NR2F6P10588 404 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 IDEP14735 1019 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 EEF1GP26641 437 aaKnown RBP2.91□□□□□ -1.94
PTPRC-208ENST00000427110 CD38P28907 300 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 GRIA3P42263 894 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 TRAPPC10P48553 1259 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 HTRA4P83105 476 aaPredicted RBP2.91□□□□□ -1.94
PTPRC-208ENST00000427110 TNFAIP2Q03169 654 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 MYO1EQ12965 1108 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 TRIM14Q14142 442 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 ELF2Q15723 593 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 GRAMD1BQ3KR37 738 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 ZIK1Q3SY52 487 aaPredicted RBP2.91□□□□□ -1.94
PTPRC-208ENST00000427110 COLEC12Q5KU26 742 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 GORABQ5T7V8 394 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 ICE2Q659A1 982 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 KCTD20Q7Z5Y7 419 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 GAS2L3Q86XJ1 694 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 RASAL3Q86YV0 1011 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 EXOC8Q8IYI6 725 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 BPIFB1Q8TDL5 484 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 BRI3BPQ8WY22 251 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 PPP2R3CQ969Q6 453 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 MUL1Q969V5 352 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 FAM136AQ96C01 138 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 CRB3Q9BUF7 120 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 PTDSS2Q9BVG9 487 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 SELENOOQ9BVL4 669 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 COLEC11Q9BWP8 271 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 MAGEB5Q9BZ81 275 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.91□□□□□ -1.94
PTPRC-208ENST00000427110 MYH16Q9H6N6 1097 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 TRMT13Q9NUP7 481 aaKnown RBP2.91□□□□□ -1.94
PTPRC-208ENST00000427110 ADAM21Q9UKJ8 722 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 NDRG4Q9ULP0 352 aaKnown RBP2.91□□□□□ -1.94
PTPRC-208ENST00000427110 MAN2B2Q9Y2E5 1009 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.91□□□□□ -1.94
PTPRC-208ENST00000427110 CDY1Q9Y6F8 540 aa2.91□□□□□ -1.94
PTPRC-208ENST00000427110 FAM234BA2RU67 622 aa2.9□□□□□ -1.95
PTPRC-208ENST00000427110 AQP7P3A6NL99 342 aa2.9□□□□□ -1.95
PTPRC-208ENST00000427110 CLCA1A8K7I4 914 aa2.9□□□□□ -1.95
PTPRC-208ENST00000427110 PPM1DO15297 605 aa2.9□□□□□ -1.95
PTPRC-208ENST00000427110 RRP9O43818 475 aaKnown RBP2.9□□□□□ -1.95
PTPRC-208ENST00000427110 RBMXL2O75526 392 aaKnown RBP2.9□□□□□ -1.95
PTPRC-208ENST00000427110 NDST3O95803 873 aa2.9□□□□□ -1.95
PTPRC-208ENST00000427110 C1RP00736 705 aa2.9□□□□□ -1.95
PTPRC-208ENST00000427110 ERBB2P04626 1255 aa2.9□□□□□ -1.95
PTPRC-208ENST00000427110 EBLN1P0CF75 366 aa2.9□□□□□ -1.95
PTPRC-208ENST00000427110 BTF3P20290 206 aaKnown RBP2.9□□□□□ -1.95
PTPRC-208ENST00000427110 YY1P25490 414 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms